Miyakogusa Predicted Gene
- Lj3g3v0428760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0428760.1 tr|Q8RW43|Q8RW43_LUPAL TCP1 protein OS=Lupinus
albus GN=tcp1 PE=2 SV=1,58.94,0,seg,NULL; TCP,Transcription factor TCP
subgroup; TCP,Transcription factor, TCP,CUFF.40721.1
(1382 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71435 homologue to UniRef100_A7PJE1 Cluster: Chromoso... 168 6e-41
gnl|LJGI|TC72565 similar to UniRef100_Q8RW43 Cluster: TCP1 prote... 84 3e-15
gnl|LJGI|BP038568 similar to UniRef100_O04237 Cluster: Transcrip... 56 6e-07
gnl|LJGI|AV424228 similar to UniRef100_A2I5C7 Cluster: Lanceolat... 56 6e-07
>gnl|LJGI|TC71435 homologue to UniRef100_A7PJE1 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 823
Score = 168 bits (85), Expect = 6e-41
Identities = 184/217 (84%)
Strand = Plus / Plus
Query: 119 aaggaggccacattgtccgcgcgaccggaagaaaagaccgccacagcaaggtttgcaccg 178
|||||||||||||||| || | || || |||||||| || || |||||||||| |||
Sbjct: 572 aaggaggccacattgttcgatccacaggtagaaaagatcggcatagcaaggtttacactt 631
Query: 179 ccaaaggtccccgggaccgccgcgttcgcctctcggcacacaccgccattcaattctacg 238
| |||||||| || |||||| | ||||| || || |||||||||||||||||||||||||
Sbjct: 632 caaaaggtcctcgtgaccgcagggttcggctatcagcacacaccgccattcaattctacg 691
Query: 239 acgtgcaggaccggttgggctacgaccgacccagcaaggccgtcgactggctcatcaaga 298
|||| || ||||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 692 acgttcaagaccgtctcggctacgaccgaccgagcaaggccgtcgactggctcatcaaga 751
Query: 299 aggcgaaaaccgccatcgacgaactcgccgagcttcc 335
||||||| ||||||| ||| | || || ||||||||
Sbjct: 752 aggcgaagtccgccattgacaagcttgctgagcttcc 788
>gnl|LJGI|TC72565 similar to UniRef100_Q8RW43 Cluster: TCP1 protein; n=1; Lupinus
albus|Rep: TCP1 protein - Lupinus albus (White lupin),
partial (7%)
Length = 795
Score = 83.8 bits (42), Expect = 3e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 1297 ataccagcacgaattcagggtgaagaggagcacgacggtgtatctgacaaaccgacctct 1356
||||||||| | ||||||||||||||||||||| ||||||||| ||||| || ||| |
Sbjct: 627 ataccagcatggattcagggtgaagaggagcacagcggtgtatccgacaagtcgtccttt 686
Query: 1357 gcttcctctgattctcgccattgatg 1382
| |||||||||||||||||||||||
Sbjct: 687 tcctcctctgattctcgccattgatg 712
>gnl|LJGI|BP038568 similar to UniRef100_O04237 Cluster: Transcription factor; n=1; Vicia
faba var. minor|Rep: Transcription factor - Vicia faba
var. minor, partial (23%)
Length = 553
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1297 ataccagcacgaattcagggtgaagaggagcacgacggtgtatc 1340
||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 452 ataccagcatggattcagggtgaagaggagcacagcggtgtatc 495
>gnl|LJGI|AV424228 similar to UniRef100_A2I5C7 Cluster: Lanceolate; n=1; Solanum
lycopersicum|Rep: Lanceolate - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (20%)
Length = 323
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 256 ggctacgaccgacccagcaaggccgtcgactggctcatcaagaa 299
||||||||||||||||||||||| | || ||||||||||||||
Sbjct: 146 ggctacgaccgacccagcaaggctatggattggctcatcaagaa 103