Miyakogusa Predicted Gene

Lj3g3v0428470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0428470.1 Non Chatacterized Hit- tr|E0CSA7|E0CSA7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.5,1e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,gene.Ljchr3_pseudomol_20120830.path1.gene681.1
         (301 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS355984 weakly similar to UniRef100_A7P1Y4 Cluster: Ch...   597   e-170
gnl|LJGI|FS346385                                                      50   8e-06

>gnl|LJGI|FS355984 weakly similar to UniRef100_A7P1Y4 Cluster: Chromosome chr19
           scaffold_4, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (34%)
          Length = 709

 Score =  597 bits (301), Expect = e-170
 Identities = 301/301 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggatgaggctgttaggttttgtaagatttctcttctttgcacacaggattctcctcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atggatgaggctgttaggttttgtaagatttctcttctttgcacacaggattctcctcag 422

                                                                       
Query: 61  aatcggccttctatgtccacagtgcttggcatgcttaggggtagaagggaagtgaatgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatcggccttctatgtccacagtgcttggcatgcttaggggtagaagggaagtgaatgag 362

                                                                       
Query: 121 gagaatgtgaccaaaccaggtatgatatttgaatttgtgcaagccatggatgaagggaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagaatgtgaccaaaccaggtatgatatttgaatttgtgcaagccatggatgaagggaaa 302

                                                                       
Query: 181 caaaaattcaagactgaagtggaaaatagcagttcagggaagcaagatgattcatcttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaaaattcaagactgaagtggaaaatagcagttcagggaagcaagatgattcatcttca 242

                                                                       
Query: 241 tcagaaactatgacctcttttgctaccatgactttcactgcaatttatgatcggagcaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcagaaactatgacctcttttgctaccatgactttcactgcaatttatgatcggagcaat 182

            
Query: 301 t 301
           |
Sbjct: 181 t 181


>gnl|LJGI|FS346385 
          Length = 569

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                       
Query: 112 gtgaatgaggagaatgtgaccaaaccaggtatgatatttgaatttgtgcaagccatggat 171
           |||||||||||||   |||| ||||||||| | |||||||| |||||| ||||||   | 
Sbjct: 539 gtgaatgaggagaggatgacaaaaccaggtttaatatttgagtttgtggaagccaatcaa 480

                                                
Query: 172 gaagggaaacaaaaattcaagactgaagtggaaaata 208
            |||||||||| |||  |||| ||||||| |||||||
Sbjct: 479 caagggaaacagaaaggcaaggctgaagttgaaaata 443