Miyakogusa Predicted Gene
- Lj3g3v0427330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0427330.1 tr|F2CWA5|F2CWA5_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,30.14,1e-17,seg,NULL,CUFF.40695.1
(1206 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72981 611 e-174
gnl|LJGI|TC62332 weakly similar to UniRef100_Q9ZV99 Cluster: F9K... 56 5e-07
>gnl|LJGI|TC72981
Length = 1003
Score = 611 bits (308), Expect = e-174
Identities = 308/308 (100%)
Strand = Plus / Plus
Query: 533 gtgagttggaagagttgtttgtgggggttttcatggaggatgatgagctgaggaggtatt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtgagttggaagagttgtttgtgggggttttcatggaggatgatgagctgaggaggtatt 646
Query: 593 accagaagtattttgaaaatggggatttttcctgcttggtttgtggtgctgttgggaaga 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 accagaagtattttgaaaatggggatttttcctgcttggtttgtggtgctgttgggaaga 706
Query: 653 agaattctgggaagaagtttaaggattgtgttggtcttgttcagcactcgatgtcggttt 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 agaattctgggaagaagtttaaggattgtgttggtcttgttcagcactcgatgtcggttt 766
Query: 713 tgcgtggggtgaggagacgggctcacagggcttttgggcaggctgtgtgcaaggttttgg 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tgcgtggggtgaggagacgggctcacagggcttttgggcaggctgtgtgcaaggttttgg 826
Query: 773 gttgggatattgataggcttccaactattgtgatgaagggggaacctcttggatgctctg 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gttgggatattgataggcttccaactattgtgatgaagggggaacctcttggatgctctg 886
Query: 833 cccaagca 840
||||||||
Sbjct: 887 cccaagca 894
Score = 500 bits (252), Expect = e-140
Identities = 252/252 (100%)
Strand = Plus / Plus
Query: 1 atggatccctacgatgaagagaggctgagaaatgaagtgatctacctccactctctctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atggatccctacgatgaagagaggctgagaaatgaagtgatctacctccactctctctgg 114
Query: 61 caccaaggaccgccacaaaaccctattccatttccaacattcccttcttcttcttcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 caccaaggaccgccacaaaaccctattccatttccaacattcccttcttcttcttcttca 174
Query: 121 caccgacccttcttccctcaacccctcctcgatccccatttcgacccaccaccgtggcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 caccgacccttcttccctcaacccctcctcgatccccatttcgacccaccaccgtggcgc 234
Query: 181 cttccccgtcatcaacaaccgccgccgccgcgcacagtttacccacctgcacccgctcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cttccccgtcatcaacaaccgccgccgccgcgcacagtttacccacctgcacccgctcac 294
Query: 241 accaccgcgttc 252
||||||||||||
Sbjct: 295 accaccgcgttc 306
Score = 392 bits (198), Expect = e-108
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 291 ccgtgctaaaatacccgacccgggtccggagtggccgtgtcccgcttcacccgacccgaa 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ccgtgctaaaatacccgacccgggtccggagtggccgtgtcccgcttcacccgacccgaa 404
Query: 351 accaaccacgggctggggttcgtcgaagccacattccgaccctcctcctgcggtttcgcc 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 accaaccacgggctggggttcgtcgaagccacattccgaccctcctcctgcggtttcgcc 464
Query: 411 tgaagagaaggagaggcttgcagcgttgcaagcgcagcacaaggcgtgcaaagttttcag 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgaagagaaggagaggcttgcagcgttgcaagcgcagcacaaggcgtgcaaagttttcag 524
Query: 471 ggagtttctgtgtgcttc 488
||||||||||||||||||
Sbjct: 525 ggagtttctgtgtgcttc 542
>gnl|LJGI|TC62332 weakly similar to UniRef100_Q9ZV99 Cluster: F9K20.15; n=1;
Arabidopsis thaliana|Rep: F9K20.15 - Arabidopsis
thaliana (Mouse-ear cress), partial (10%)
Length = 1186
Score = 56.0 bits (28), Expect = 5e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 611 atggggatttttcctgcttggtttgtggtgctgttgggaagaag 654
|||||||||||| || ||||||||||||| |||||||||||||
Sbjct: 637 atggggatttttattgtttggtttgtggtggtgttgggaagaag 680