Miyakogusa Predicted Gene
- Lj3g3v0426270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0426270.1 Non Chatacterized Hit- tr|D8QS06|D8QS06_SELML
Putative uncharacterized protein OS=Selaginella
moelle,27.88,1e-18,PPR,Pentatricopeptide repeat; TPR-like,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopeptide ,CUFF.40688.1
(1377 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS340646 similar to UniRef100_A7P216 Cluster: Chromosom... 1445 0.0
gnl|LJGI|TC72227 similar to UniRef100_A7P216 Cluster: Chromosome... 870 0.0
>gnl|LJGI|FS340646 similar to UniRef100_A7P216 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 810
Score = 1445 bits (729), Expect = 0.0
Identities = 729/729 (100%)
Strand = Plus / Plus
Query: 1 atggcgacaccaaaacctatatcacccttcagactctcctccctcctccgatcacagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggcgacaccaaaacctatatcacccttcagactctcctccctcctccgatcacagaag 141
Query: 61 gacccatccgtcgcattccaactcttcctcaaccccaacccccaaaccaaccaccgcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gacccatccgtcgcattccaactcttcctcaaccccaacccccaaaccaaccaccgcccc 201
Query: 121 ttccgccactccctcctctcctacgacctcatcatcaccaaactcggccgcgccaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttccgccactccctcctctcctacgacctcatcatcaccaaactcggccgcgccaaaatg 261
Query: 181 ctccccgaaatggaacaagtcctccaccaactccacctcgacacgcgccaccgcgtcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctccccgaaatggaacaagtcctccaccaactccacctcgacacgcgccaccgcgtcccg 321
Query: 241 gagcccctcctctgccacgtcatcactttctacgcccgcgcccgccaaccctcacgcgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gagcccctcctctgccacgtcatcactttctacgcccgcgcccgccaaccctcacgcgcc 381
Query: 301 gtccagaccttcctctccatcccctccttccgctgtcaacggaccctcaagtccttcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtccagaccttcctctccatcccctccttccgctgtcaacggaccctcaagtccttcaac 441
Query: 361 acgctcctccacgcgctactcacctgccgccagttcgatgctgtgaccgagctcgccgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acgctcctccacgcgctactcacctgccgccagttcgatgctgtgaccgagctcgccgcc 501
Query: 421 cgcgccggtgagttcggagccccggacgcctgcacctacaacatcctcatccgggcgagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cgcgccggtgagttcggagccccggacgcctgcacctacaacatcctcatccgggcgagt 561
Query: 481 tgcctccgcggccacgcggatcgtgcatttgaactgttcgatgaaatgcgcagccgaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgcctccgcggccacgcggatcgtgcatttgaactgttcgatgaaatgcgcagccgaggt 621
Query: 541 gtccgccctgatcaggccacgttcgggacgttaatccacaggctgtgcgagaattcgcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtccgccctgatcaggccacgttcgggacgttaatccacaggctgtgcgagaattcgcgg 681
Query: 601 ctgcgcgaggcgtttgagctgaaagaggagatgtttagggagttcaagttggaggggtgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctgcgcgaggcgtttgagctgaaagaggagatgtttagggagttcaagttggaggggtgt 741
Query: 661 gtaactatttacaccaacttgatcaagggggtttgcaagattggtgagctcagttgggct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gtaactatttacaccaacttgatcaagggggtttgcaagattggtgagctcagttgggct 801
Query: 721 tttaggatc 729
|||||||||
Sbjct: 802 tttaggatc 810
>gnl|LJGI|TC72227 similar to UniRef100_A7P216 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 484
Score = 870 bits (439), Expect = 0.0
Identities = 442/443 (99%)
Strand = Plus / Plus
Query: 1 atggcgacaccaaaacctatatcacccttcagactctcctccctcctccgatcacagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atggcgacaccaaaacctatatcacccttcagactctcctccctcctccgatcacagaag 101
Query: 61 gacccatccgtcgcattccaactcttcctcaaccccaacccccaaaccaaccaccgcccc 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 102 gacccatccgtcgcattccaactcttcctctaccccaacccccaaaccaaccaccgcccc 161
Query: 121 ttccgccactccctcctctcctacgacctcatcatcaccaaactcggccgcgccaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ttccgccactccctcctctcctacgacctcatcatcaccaaactcggccgcgccaaaatg 221
Query: 181 ctccccgaaatggaacaagtcctccaccaactccacctcgacacgcgccaccgcgtcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ctccccgaaatggaacaagtcctccaccaactccacctcgacacgcgccaccgcgtcccg 281
Query: 241 gagcccctcctctgccacgtcatcactttctacgcccgcgcccgccaaccctcacgcgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gagcccctcctctgccacgtcatcactttctacgcccgcgcccgccaaccctcacgcgcc 341
Query: 301 gtccagaccttcctctccatcccctccttccgctgtcaacggaccctcaagtccttcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtccagaccttcctctccatcccctccttccgctgtcaacggaccctcaagtccttcaac 401
Query: 361 acgctcctccacgcgctactcacctgccgccagttcgatgctgtgaccgagctcgccgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 acgctcctccacgcgctactcacctgccgccagttcgatgctgtgaccgagctcgccgcc 461
Query: 421 cgcgccggtgagttcggagcccc 443
|||||||||||||||||||||||
Sbjct: 462 cgcgccggtgagttcggagcccc 484