Miyakogusa Predicted Gene
- Lj3g3v0424000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0424000.1 Non Chatacterized Hit- tr|I1J1V7|I1J1V7_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.83,0.00000000000001,seg,NULL,CUFF.40671.1
(696 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72646 similar to UniRef100_A7QD65 Cluster: Chromosome... 866 0.0
gnl|LJGI|DC596962 similar to UniRef100_A7QD65 Cluster: Chromosom... 404 e-112
gnl|LJGI|AV773553 similar to UniRef100_Q3MJK6 Cluster: Cement pr... 202 2e-51
gnl|LJGI|TC64882 similar to UniRef100_A7QD65 Cluster: Chromosome... 107 9e-23
>gnl|LJGI|TC72646 similar to UniRef100_A7QD65 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (42%)
Length = 984
Score = 866 bits (437), Expect = 0.0
Identities = 443/445 (99%)
Strand = Plus / Plus
Query: 1 atggttatagagcagaatcagaggatgatgaagaatgaatcaaacggtgagaaatcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggttatagagcagaatcagaggatgatgaagaatgaatcaaacggtgagaaatcaaag 147
Query: 61 gctctgatgactcgtgacttgcttggtggatcctccattgaatcccaggaattggacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gctctgatgactcgtgacttgcttggtggatcctccattgaatcccaggaattggacctt 207
Query: 121 gacatgcgtgtaccctcaggctgggagaagcgcttggaccttcagtcagggaaattgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gacatgcgtgtaccctcaggctgggagaagcgcttggaccttcagtcagggaaattgtac 267
Query: 181 attcagaggcacaactcattagcttcacctgtgtctgaacacaaatgtcaacagaatcaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 268 attcagaggcacaactcattagcttcacctgtgtctgaacacaaatgtcaactgaatcaa 327
Query: 241 gcaggtccacaacttaaagacctaaaattcactcctccttcatcaaaaattcccttgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gcaggtccacaacttaaagacctaaaattcactcctccttcatcaaaaattcccttgaac 387
Query: 301 cttttttatgacacaagcttggatttgaagctggtttcatattcattgcccttatcaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cttttttatgacacaagcttggatttgaagctggtttcatattcattgcccttatcaaac 447
Query: 361 aattatgaaagcgtgtgcactctcgacaaggtgaaatcagcacttgaaagagcagagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aattatgaaagcgtgtgcactctcgacaaggtgaaatcagcacttgaaagagcagagaaa 507
Query: 421 gagccggcaattttaaggaagaggg 445
|||||||| ||||||||||||||||
Sbjct: 508 gagccggccattttaaggaagaggg 532
Score = 343 bits (173), Expect = 9e-94
Identities = 185/189 (97%)
Strand = Plus / Plus
Query: 508 ataataacccaagaagaagaagaatgtgaagtgaagatcttggcttcaccggttgctaca 567
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ataataacccaagcagaagaagaatgtgaagtgaagatcttggcttcaccggttgctaca 654
Query: 568 gggtgtcctggttgcttaacttatgtgttggtaacgaagaacaatcccaagtgtccaagg 627
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 655 gggtgtcctggttgcttaacttatgttttggttacgaagaacaatcccaagtgtccaagg 714
Query: 628 tgcaacactaatgttccttttcgtttgatgaagaaaccaagacttgatcttaatttgtca 687
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 715 tgcaacactaatgttccttttcgtttgatgaagaaacccagacttgatcttaatttgtca 774
Query: 688 atttgaaat 696
|||||||||
Sbjct: 775 atttgaaat 783
>gnl|LJGI|DC596962 similar to UniRef100_A7QD65 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 508
Score = 404 bits (204), Expect = e-112
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 163 cagtcagggaaattgtacattcagaggcacaactcattagcttcacctgtgtctgaacac 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cagtcagggaaattgtacattcagaggcacaactcattagcttcacctgtgtctgaacac 364
Query: 223 aaatgtcaacagaatcaagcaggtccacaacttaaagacctaaaattcactcctccttca 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaatgtcaacagaatcaagcaggtccacaacttaaagacctaaaattcactcctccttca 424
Query: 283 tcaaaaattcccttgaaccttttttatgacacaagcttggatttgaagctggtttcatat 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcaaaaattcccttgaaccttttttatgacacaagcttggatttgaagctggtttcatat 484
Query: 343 tcattgcccttatcaaacaattat 366
||||||||||||||||||||||||
Sbjct: 485 tcattgcccttatcaaacaattat 508
Score = 327 bits (165), Expect = 5e-89
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1 atggttatagagcagaatcagaggatgatgaagaatgaatcaaacggtgagaaatcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atggttatagagcagaatcagaggatgatgaagaatgaatcaaacggtgagaaatcaaag 126
Query: 61 gctctgatgactcgtgacttgcttggtggatcctccattgaatcccaggaattggacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gctctgatgactcgtgacttgcttggtggatcctccattgaatcccaggaattggacctt 186
Query: 121 gacatgcgtgtaccctcaggctgggagaagcgcttggaccttcag 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gacatgcgtgtaccctcaggctgggagaagcgcttggaccttcag 231
>gnl|LJGI|AV773553 similar to UniRef100_Q3MJK6 Cluster: Cement protein 3B variant 4;
n=1; Phragmatopoma californica|Rep: Cement protein 3B
variant 4 - Phragmatopoma californica, partial (16%)
Length = 344
Score = 202 bits (102), Expect = 2e-51
Identities = 169/182 (92%), Gaps = 7/182 (3%)
Strand = Plus / Minus
Query: 522 agaagaagaatgtgaagtgaagatcttggctt-caccggttgctac-agggtgtc-ctgg 578
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||
Sbjct: 268 agaagaagaatgtgaagtgaagatcttggcttgcaccggttgctaccagggtgtcgctgg 209
Query: 579 ttgctta-acttatgtgttggtaacga-agaacaatc-ccaagtgtcca-aggtgcaaca 634
||||||| ||||||||||||||||||| ||||||||| || ||||||| ||||||||||
Sbjct: 208 ttgcttatacttatgtgttggtaacgagagaacaatcacccagtgtccccaggtgcaaca 149
Query: 635 ctaatgttccttttcgtttgatgaagaaaccaagacttgatcttaatttgtcaatttgaa 694
|| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 148 ctcatgttccttttcgtttgatgaagaaacccagacctgatcttaatttgtccatttgaa 89
Query: 695 at 696
||
Sbjct: 88 at 87
>gnl|LJGI|TC64882 similar to UniRef100_A7QD65 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 752
Score = 107 bits (54), Expect = 9e-23
Identities = 116/136 (85%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 290 ttcccttgaaccttttttatgacacaagcttggatttgaagctggtttcatattcattgc 349
|||| ||||| || ||| |||| |||||||| || |||||||||||||||| | | |||
Sbjct: 163 ttcctttgaatctctttgatgaaacaagcttagacttgaagctggtttcatctgctgtgc 222
Query: 350 ccttatcaaacaattatgaaagcgtgtgcactctcgacaaggtgaaatcagcacttgaaa 409
| | ||| ||||||| |||| |||||||| || |||||||||||||||||||||||||
Sbjct: 223 c---accaagcaattatcaaagtgtgtgcacccttgacaaggtgaaatcagcacttgaaa 279
Query: 410 gagcagagaaagagcc 425
||||||||||||||||
Sbjct: 280 gagcagagaaagagcc 295
Score = 69.9 bits (35), Expect = 2e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 566 cagggtgtcctggttgcttaacttatgtgttggtaacgaagaacaatcccaagtgtccaa 625
||||||| |||||||| ||| | |||||| || ||| ||||||||||||||||||||| |
Sbjct: 439 cagggtgccctggttgtttatcctatgtgctgataatgaagaacaatcccaagtgtccta 498
Query: 626 ggtgcaacactaatgttcc 644
|||| ||| ||| ||||||
Sbjct: 499 ggtgtaactctattgttcc 517