Miyakogusa Predicted Gene

Lj3g3v0423990.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0423990.1 Non Chatacterized Hit- tr|D7SX10|D7SX10_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.58,4e-19,RecA protein, C-terminal domain,DNA recombination and
repair protein RecA, C-terminal; RecA,DNA reco,CUFF.40685.1
         (240 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69810 similar to UniRef100_Q39199 Cluster: DNA repair...   476   e-134

>gnl|LJGI|TC69810 similar to UniRef100_Q39199 Cluster: DNA repair protein recA
           homolog 1, chloroplast precursor; n=1; Arabidopsis
           thaliana|Rep: DNA repair protein recA homolog 1,
           chloroplast precursor - Arabidopsis thaliana (Mouse-ear
           cress), partial (19%)
          Length = 870

 Score =  476 bits (240), Expect = e-134
 Identities = 240/240 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggatattgtcttaaagaagggatcttggtacagctatggggaccaacggttagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atgatggatattgtcttaaagaagggatcttggtacagctatggggaccaacggttagga 185

                                                                       
Query: 61  cagggaagggacaaagcaatacaatacttgaatgagaacccacatcttctacacgaagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cagggaagggacaaagcaatacaatacttgaatgagaacccacatcttctacacgaagtt 245

                                                                       
Query: 121 gaaaagatagttcgttcttcattgattgatggaactaaccaaacaagcctggggtacatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gaaaagatagttcgttcttcattgattgatggaactaaccaaacaagcctggggtacatg 305

                                                                       
Query: 181 aagtttagtccaacgctccatcaagatgacgacgacacatttgaggaagctcaatgataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aagtttagtccaacgctccatcaagatgacgacgacacatttgaggaagctcaatgataa 365