Miyakogusa Predicted Gene
- Lj3g3v0423790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0423790.1 tr|B9MZX0|B9MZX0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_782912 PE=4
SV=1,31.36,3e-18,seg,NULL; Leucine-rich repeats, typical (most
populate,Leucine-rich repeat, typical subtype;
Leucine,NODE_49524_length_2263_cov_12.425099.path1.1
(2034 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO004933 weakly similar to UniRef100_Q3IA99 Cluster: Di... 642 0.0
gnl|LJGI|TC62701 similar to UniRef100_A3CYW8 Cluster: Protoheme ... 301 9e-81
gnl|LJGI|TC79632 weakly similar to UniRef100_Q3IA99 Cluster: Dis... 133 5e-30
gnl|LJGI|GO025974 weakly similar to UniRef100_Q3IA99 Cluster: Di... 121 2e-26
gnl|LJGI|TC82468 weakly similar to UniRef100_Q3IA99 Cluster: Dis... 100 7e-20
>gnl|LJGI|GO004933 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French bean),
partial (9%)
Length = 651
Score = 642 bits (324), Expect = 0.0
Identities = 545/616 (88%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 1268 atctggagtcacttcccaacagcatttgcaatctaaagcgtctctctgagcttgattgtt 1327
|||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||| ||||
Sbjct: 38 atctggagtcacttccaaacagcatttgcaatctaaagcttctatctaagcttgactgtt 97
Query: 1328 caagttgtggtaaattaaccgaaatcccaaatgacataggctgcttgtcatcattaagga 1387
|| ||||| | || ||||| ||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 98 caggttgtcgcaacttaacagaaatcccaaatgacattggccgcttgtcatcattaagga 157
Query: 1388 acttgattctgaagaataccggaattgtgaacctcccagagagtattgcttatctttcaa 1447
||||| ||| | |||| |||||||||| |||||||||| |||| | |||||||||
Sbjct: 158 acttgcaactgcatcgtaccaaaattgtgaacttcccagagagcattggtcatctttcaa 217
Query: 1448 gcttggaatcacttaatgtaagttataccaaaattgtgaacctcccagagagtattgctc 1507
|||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||
Sbjct: 218 gcttggaatcacttaatgcaagttataccggaattgtgaaccttccagagagtattgctc 277
Query: 1508 gtctttcaagcttggaatcacttaatgtaagttataccagaattgtgaacctccccgaga 1567
||||||||||||| | |||||||||||||||||| || |||||||||||| || ||||
Sbjct: 278 atctttcaagcttgaactcacttaatgtaagttattccgaaattgtgaaccttccagaga 337
Query: 1568 gtattgctcatctttcaaccttggaatcacttaatgtaagttataccgaaattgtgaacc 1627
| || | ||||||||||| |||| |||||||||||||||||||||| | | |||||||||
Sbjct: 338 gcatgggtcatctttcaagcttgaaatcacttaatgtaagttatactggagttgtgaacc 397
Query: 1628 ttccagagagtattgctcaactttcaagcttgaaatcacttaatatcagtggttgcagaa 1687
||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||
Sbjct: 398 ttccagagagtattgctcatctttcaaccttgaaatcacttaatgtcagtggttgcagaa 457
Query: 1688 aggttgaatgtatcccacaacttccaccatttctgaaagagttattggcaattgattgcc 1747
|| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||
Sbjct: 458 agcttgaatgtatcccaaaacttccaccatttctgaaatggttattggcatttgattgcc 517
Query: 1748 catttattagaagagtgatttttaattcaaccttcaaacacccgtcagattccaaaaaag 1807
||| |||| ||||||||||| |||||||| ||||||||||| ||||||||| ||| ||
Sbjct: 518 catccattacaagagtgatttcaaattcaacgttcaaacacccttcagattcc-aaagag 576
Query: 1808 gcaccttccaatttcatttcaccagtaatgaaaaacagtatccaagtgctagtagtgatg 1867
| ||||||||||||||||||| |||||||||| | || ||||||||||| |||||||||
Sbjct: 577 gtaccttccaatttcatttca-cagtaatgaagatcacgatccaagtgcttgtagtgatg 635
Query: 1868 ttgtgtctgatgcaag 1883
||||| | ||||||||
Sbjct: 636 ttgtggccgatgcaag 651
>gnl|LJGI|TC62701 similar to UniRef100_A3CYW8 Cluster: Protoheme IX farnesyltransferase
precursor; n=2; Shewanella baltica|Rep: Protoheme IX
farnesyltransferase precursor - Shewanella baltica
(strain OS155 / ATCC BAA-1091), partial (7%)
Length = 881
Score = 301 bits (152), Expect = 9e-81
Identities = 236/264 (89%)
Strand = Plus / Plus
Query: 1771 aattcaaccttcaaacacccgtcagattccaaaaaaggcaccttccaatttcatttcacc 1830
|||||||| ||||||||||| |||||||||||| |||| || ||||||||||||||||||
Sbjct: 18 aattcaacgttcaaacacccttcagattccaaagaaggtactttccaatttcatttcacc 77
Query: 1831 agtaatgaaaaacagtatccaagtgctagtagtgatgttgtgtctgatgcaaggcttcgg 1890
||||||||| | ||| ||||||||||| |||||||||||||| | |||||||||||| |
Sbjct: 78 agtaatgaagatcaggatccaagtgcttgtagtgatgttgtggccgatgcaaggcttaag 137
Query: 1891 atcagtgaagatgcatatagatttgtgtactatttgtttccagggagtgcagttcctcat 1950
||| || ||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 138 gtcatagaggatgcatatagatttgtgtactattgctttccagggagtgcggttccatat 197
Query: 1951 tggttcccttatcgttccaatggaaattcggtaactgtggataaagattctctaaattgg 2010
|||||||||||||| | | | ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 198 tggttcccttatcgatgcgagggagattcagtaactgtggataaagattctctaaattgg 257
Query: 2011 tgcaatgataacaggctcatcggt 2034
||||||||||||||||||||||||
Sbjct: 258 tgcaatgataacaggctcatcggt 281
>gnl|LJGI|TC79632 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French bean),
partial (18%)
Length = 487
Score = 133 bits (67), Expect = 5e-30
Identities = 160/191 (83%)
Strand = Plus / Plus
Query: 1280 ttcccaacagcatttgcaatctaaagcgtctctctgagcttgattgttcaagttgtggta 1339
|||| ||||||||||| |||||||||| ||||||| ||||||| |||||| | |||||||
Sbjct: 296 ttccaaacagcatttgtaatctaaagcttctctctaagcttgactgttcaggctgtggta 355
Query: 1340 aattaaccgaaatcccaaatgacataggctgcttgtcatcattaaggaacttgattctga 1399
||||||| | ||| ||| |||||||||| || || |||||||||||| ||| |||
Sbjct: 356 aattaacaggaataccagatgacataggtcgcatgctatcattaaggaaattgtcactgc 415
Query: 1400 agaataccggaattgtgaacctcccagagagtattgcttatctttcaagcttggaatcac 1459
| ||| ||| |||||||| ||||| ||||||||| |||||||||||||||||||||
Sbjct: 416 aaggcaccaaaatcgtgaaccttccagatagtattgctcatctttcaagcttggaatcac 475
Query: 1460 ttaatgtaagt 1470
|||||||||||
Sbjct: 476 ttaatgtaagt 486
Score = 99.6 bits (50), Expect = 7e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1474 accaaaattgtgaacctcccagagagtattgctcgtctttcaagcttggaatcacttaat 1533
|||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 421 accaaaatcgtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaat 480
Query: 1534 gtaagt 1539
||||||
Sbjct: 481 gtaagt 486
Score = 83.8 bits (42), Expect = 4e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1543 accagaattgtgaacctccccgagagtattgctcatctttcaaccttggaatcacttaat 1602
|||| ||| |||||||| || || ||||||||||||||||||| ||||||||||||||||
Sbjct: 421 accaaaatcgtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaat 480
Query: 1603 gtaagt 1608
||||||
Sbjct: 481 gtaagt 486
Score = 79.8 bits (40), Expect = 6e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1616 aaattgtgaaccttccagagagtattgctcaactttcaagcttgaaatcacttaat 1671
|||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||
Sbjct: 425 aaatcgtgaaccttccagatagtattgctcatctttcaagcttggaatcacttaat 480
Score = 58.0 bits (29), Expect = 2e-07
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 874 acaatggaaaatttagcggtgcttgaattagaccaaacagcaatacaagaactaccttca 933
||||||||| ||||||| |||||| |||| | |||||||||| |||| ||||||| ||
Sbjct: 172 acaatggaacatttagctgtgcttatcttaggcgaaacagcaattcaagcactacctgca 231
Query: 934 tcccttcactgtttggtggggcttg 958
||| | ||| ||||||||||||||
Sbjct: 232 tccttgcaccttttggtggggcttg 256
>gnl|LJGI|GO025974 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French
bean), partial (20%)
Length = 676
Score = 121 bits (61), Expect = 2e-26
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 10 ctcaaagataggggcctgatatctattttgggagataaagtcatggtgcatgatctaatt 69
|||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 544 ctcaaagataggtgccttatatctattttgggagatcgagtcatggtgcatgatctaata 603
Query: 70 caggaaatgggaatggatattgttcatcaagaatgtgccaatgatcctggaaaacgtagt 129
| ||||||||||| || |||||| || | |||||| | |||||||| || |||| |||
Sbjct: 604 ctggaaatgggaaaagaaattgtttgtcgacaatgtgtccatgatcctagagaacgcagt 663
Query: 130 cgtttatggaacc 142
|||||||||||||
Sbjct: 664 cgtttatggaacc 676
>gnl|LJGI|TC82468 weakly similar to UniRef100_Q3IA99 Cluster: Disease resistance
protein; n=1; Phaseolus vulgaris|Rep: Disease resistance
protein - Phaseolus vulgaris (Kidney bean) (French
bean), partial (21%)
Length = 918
Score = 99.6 bits (50), Expect = 7e-20
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 1 atggatgttctcaaagataggggcctgatatctattttgggagataaagtcatggtgcat 60
||||| ||||||||||||||| | || || |||||||||| || || | || || |||||
Sbjct: 388 atggaggttctcaaagataggtgtcttatttctattttggaaggtagaatcgtgatgcat 447
Query: 61 gatctaattcaggaaatgggaatggatattgttcatcaagaatgtgccaatgatcctgga 120
|||||||| ||| |||||||| || || |||| |||| ||||| ||||||||||||||
Sbjct: 448 gatctaatagaggtaatgggaaaagaaatagttcgtcaacaatgtcccaatgatcctgga 507
Query: 121 aaacgtagtcgtttatggaaccatga 146
||||| ||||| ||||||||| ||||
Sbjct: 508 aaacgcagtcgattatggaacgatga 533