Miyakogusa Predicted Gene
- Lj3g3v0397400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0397400.1 tr|G7ZWA9|G7ZWA9_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_038s0023 PE=4 SV=1,42.29,9.00054e-42,F_box_assoc_1:
F-box protein interaction domain,F-box associated interaction
domain,CUFF.40641.1
(799 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343486 similar to UniRef100_Q0J605 Cluster: Os08g0382... 704 0.0
gnl|LJGI|TC70614 448 e-125
gnl|LJGI|TC76079 weakly similar to UniRef100_Q2HWB4 Cluster: Cyc... 86 4e-16
>gnl|LJGI|FS343486 similar to UniRef100_Q0J605 Cluster: Os08g0382800 protein; n=1;
Oryza sativa Japonica Group|Rep: Os08g0382800 protein -
Oryza sativa subsp. japonica (Rice), partial (6%)
Length = 818
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1 atgtctgaaagattagtgtcgttttgctatggaagaagatatttcaggtacaagatgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 atgtctgaaagattagtgtcgttttgctatggaagaagatatttcaggtacaagatgaac 523
Query: 61 ttctgttatgataattcaaccaacacttacaaggtggtgtactttagaattgataaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttctgttatgataattcaaccaacacttacaaggtggtgtactttagaattgataaaaca 583
Query: 121 gatagagcttcacatgtccaaatcttcaccttgggtggtggttctaatggttggagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gatagagcttcacatgtccaaatcttcaccttgggtggtggttctaatggttggagagac 643
Query: 181 attcaaaatttcccactgcttccatttagctatgatgattcgggtgtaaatgatggggcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 attcaaaatttcccactgcttccatttagctatgatgattcgggtgtaaatgatggggcg 703
Query: 241 catttgagtggcactattaactggatggcatctcgtcgtgatgaatccgcgcctcattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 catttgagtggcactattaactggatggcatctcgtcgtgatgaatccgcgcctcattat 763
Query: 301 aatccagagactattactgttgaacaacttgtcatcctttcacttgatcttggga 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aatccagagactattactgttgaacaacttgtcatcctttcacttgatcttggga 818
>gnl|LJGI|TC70614
Length = 530
Score = 448 bits (226), Expect = e-125
Identities = 238/242 (98%)
Strand = Plus / Plus
Query: 558 gcgtcgcctttcaccattcactcatcataaagagtgtttccttcatccattaagttatgc 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgtcgcctttcaccattcactcatcataaagagtgtttccttcatccattaagttatgc 60
Query: 618 ctatcgattattttacaatggtgatacactggtattggcggttgggcgtcaagcaatact 677
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 ctatcgattattttacaatggtgatacactggtattggcggttggtcgtcaagcaatact 120
Query: 678 ctataaaaggagctccaacaaaattgagcaacctacaactacaaatagagaattttgtcg 737
|||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctataacaggagctccaacacatttgagcaacctacaactacaaatagagaattttgtcg 180
Query: 738 gtacaaattttcttggtacttagccttggattatgttgaaagcttggtttcgccgtatta 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtacaaattttcttggtacttagccttggattatgttgaaagcttggtttcgccgtatta 240
Query: 798 ag 799
||
Sbjct: 241 ag 242
>gnl|LJGI|TC76079 weakly similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (11%)
Length = 818
Score = 85.7 bits (43), Expect = 4e-16
Identities = 99/117 (84%), Gaps = 3/117 (2%)
Strand = Plus / Plus
Query: 240 gcatttgagtggcactattaactggatggcatctcgtcgtgatgaatccgcgcctcatta 299
|||||||||||||||| |||||||||| |||||||| |||||||||| | |||
Sbjct: 705 gcatttgagtggcactcttaactggatcacatctcgta---atgaatccgctagttgtta 761
Query: 300 taatccagagactattactgttgaacaacttgtcatcctttcacttgatcttgggac 356
||||| |||||||||||||||||||||||||| || ||||| |||| |||||||||
Sbjct: 762 taatcgagagactattactgttgaacaacttgcgattctttcgcttggtcttgggac 818