Miyakogusa Predicted Gene
- Lj3g3v0397290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0397290.1 tr|G7KLX9|G7KLX9_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_6g055210 PE=4
SV=1,43.57,0,F_box_assoc_1: F-box protein interaction domain,F-box
associated interaction domain; seg,NULL,CUFF.40649.1
(809 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76079 weakly similar to UniRef100_Q2HWB4 Cluster: Cyc... 674 0.0
gnl|LJGI|AV772011 weakly similar to UniRef100_A7PWQ8 Cluster: Ch... 204 6e-52
gnl|LJGI|FS343486 similar to UniRef100_Q0J605 Cluster: Os08g0382... 84 2e-15
>gnl|LJGI|TC76079 weakly similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (11%)
Length = 818
Score = 674 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Plus
Query: 1 atgtctgaaaaattagggtcttgtcgtgttgataacaatagttttataaagtataacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atgtctgaaaaattagggtcttgtcgtgttgataacaatagttttataaagtataacttt 534
Query: 61 ggttatgatcattcaacaaattcttacaaggttgttaagtttgttactacccatttatca 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 535 ggttatgatcattcaacaaattcttacaaggttgttaagtttgttaccacccatttatca 594
Query: 121 aacaatgtgagcatcaggatttacatcttgggtgataatgtttggagagacattcaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aacaatgtgagcatcaggatttacatcttgggtgataatgtttggagagacattcaaaat 654
Query: 181 tttcccctgcttcctttacacttaaattgtataggtctaaagttttgggtgcatttgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tttcccctgcttcctttacacttaaattgtataggtctaaagttttgggtgcatttgagt 714
Query: 241 ggcactcttaactggatcacatctcgtaatgaatccgctagttgttataatcgagagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggcactcttaactggatcacatctcgtaatgaatccgctagttgttataatcgagagact 774
Query: 301 attactgttgaacaacttgcgattctttcgcttggtcttgggac 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 attactgttgaacaacttgcgattctttcgcttggtcttgggac 818
>gnl|LJGI|AV772011 weakly similar to UniRef100_A7PWQ8 Cluster: Chromosome chr19
scaffold_35, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_35, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 447
Score = 204 bits (103), Expect = 6e-52
Identities = 137/147 (93%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 664 ctatatagtaagacagctaatacagtaca-gcgaactgcacttacaactactacaacaga 722
||||||||||||||||||||||| |||| |||||||||||||||||||||||| || |
Sbjct: 447 ctatatagtaagacagctaataccgtacccgcgaactgcacttacaactactactaccgc 388
Query: 723 aaaaatactttggttccttgcctccgagtatgttgaaagcttggtttcaccattgagagt 782
| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 387 cacaatactttggttccttgcctccgagtatgttgaaagcttggtttcacccttgagagt 328
Query: 783 tggatcttctacaactgttgcttgact 809
|||||||||||| ||||||||||||||
Sbjct: 327 tggatcttctaccactgttgcttgact 301
>gnl|LJGI|FS343486 similar to UniRef100_Q0J605 Cluster: Os08g0382800 protein; n=1;
Oryza sativa Japonica Group|Rep: Os08g0382800 protein -
Oryza sativa subsp. japonica (Rice), partial (6%)
Length = 818
Score = 83.8 bits (42), Expect = 2e-15
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 231 gcatttgagtggcactcttaactggatcacatctcgta---atgaatccgctagttgtta 287
|||||||||||||||| |||||||||| |||||||| |||||||||| | |||
Sbjct: 703 gcatttgagtggcactattaactggatggcatctcgtcgtgatgaatccgcgcctcatta 762
Query: 288 taatcgagagactattactgttgaacaacttgcgattctttcgcttggtcttggga 343
||||| |||||||||||||||||||||||||| || ||||| |||| ||||||||
Sbjct: 763 taatccagagactattactgttgaacaacttgtcatcctttcacttgatcttggga 818