Miyakogusa Predicted Gene
- Lj3g3v0397240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0397240.1 Non Chatacterized Hit- tr|I1MJ92|I1MJ92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53798 PE,68.03,0,FAMILY
NOT NAMED,NULL; NAC,No apical meristem (NAM) protein; NAM,No apical
meristem (NAM) protein; N,CUFF.40630.1
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP074116 similar to UniRef100_Q0ZS35 Cluster: Two pore ... 688 0.0
gnl|LJGI|TC77031 similar to UniRef100_A7PWQ3 Cluster: Chromosome... 331 5e-90
gnl|LJGI|TC76814 homologue to UniRef100_Q52QR3 Cluster: NAC3 pro... 62 7e-09
>gnl|LJGI|BP074116 similar to UniRef100_Q0ZS35 Cluster: Two pore domain potassium
channel number 2; n=1; Aplysia californica|Rep: Two pore
domain potassium channel number 2 - Aplysia californica
(California sea hare), partial (5%)
Length = 405
Score = 688 bits (347), Expect = 0.0
Identities = 350/351 (99%)
Strand = Plus / Minus
Query: 583 ttgagacagttagcagctaagcgtgcatccactgacaagatcaccaaaatgagaagtttg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttgagacagttagcagctaagcgtgcatccactgacaagatcaccaaaatgagaagtttg 346
Query: 643 gagtgtgattacactaatcaagaagcatacataaactttggtacaaactttggtcattat 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gagtgtgattacactaatcaagaagcatacataaactttggtacaaactttggtcattat 286
Query: 703 gctaatgatcataggcatgtgattaacaacaacacaagcagtgatcaaaggcatcatcat 762
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 285 gctaatgatcataggcatgtgattaacaacaacacaagcagtgatccaaggcatcatcat 226
Query: 763 caggttcatgtaggtctgctgaactctccggcggcacaaccacctcgattatcggcaccg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 caggttcatgtaggtctgctgaactctccggcggcacaaccacctcgattatcggcaccg 166
Query: 823 tcttcagacttctggaacagccctgcggccaatgacttcttcacgtttgagaattgggac 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tcttcagacttctggaacagccctgcggccaatgacttcttcacgtttgagaattgggac 106
Query: 883 gagcttggatcggttgtgaagtttgctgctgattcgcctatgatgtaaata 933
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gagcttggatcggttgtgaagtttgctgctgattcgcctatgatgtaaata 55
>gnl|LJGI|TC77031 similar to UniRef100_A7PWQ3 Cluster: Chromosome chr19 scaffold_35,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_35, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 1159
Score = 331 bits (167), Expect = 5e-90
Identities = 343/400 (85%), Gaps = 5/400 (1%)
Strand = Plus / Plus
Query: 58 gaagttccacttcccgggttccgtttccaccccacagatgaagaacttctaggtttctat 117
|||||||||||||| || || || ||||| |||||||||||||||||| | ||||||||
Sbjct: 107 gaagttccacttccaggatttcgcttccatcccacagatgaagaacttgttagtttctat 166
Query: 118 cttcgccggaagcttgacaacaaacccattactctcgaactcatcaaacagattgatatc 177
||||| |||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 167 cttcgaaggaagcttgacaacaaacccatcagtatcgaactcatcaaacagattgatatc 226
Query: 178 tacaaatatgatccatgggatcttccaaaagcaagt---agtagtggtggagagaaggag 234
|||||| | ||||| ||||| ||||||||||| | | |||| ||| || || ||||||
Sbjct: 227 tacaaacacgatccttgggaccttccaaaagctactgtcagtactggaggtgaaaaggag 286
Query: 235 tggtacttcttttgcaaaagagggaggaagtataggaacagcataaggcccaacagagtc 294
||||||||| ||| || ||||||||||||||||| || ||| | ||||||||||||||
Sbjct: 287 gggtacttctattgtaagagagggaggaagtatagaaatagcgtcaggcccaacagagtg 346
Query: 295 actggctctgggttctggaaagcaacagggatagacaagccagtgtactcactcggagga 354
|| || ||||||||| ||||||||| || |||||||| ||||||||||| | ||||||
Sbjct: 347 accgggtctgggttc--gaaagcaactggtatagacaaaccagtgtactcccatggagga 404
Query: 355 gaaggcaatgactgcataggactcaagaaaacactggtttactaccgcggcagcgcaggc 414
||||| |||| || | || ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 405 gaaggacatgagtgtgttgggctcaagaaaacactggtgtactaccgtggcagcgccggc 464
Query: 415 aaaggcaccaaaactgactggatgatgcacgagtttcgcc 454
|| |||||||||||||| ||||||||||||||||||||||
Sbjct: 465 aagggcaccaaaactgattggatgatgcacgagtttcgcc 504
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 504 tgcccaagaagctgaaatttggacattgtgtcgaattttcaagagaa 550
|||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 569 tgcccaagaagccgaaatttggacattgtgtcgaatcttcaaaagaa 615
>gnl|LJGI|TC76814 homologue to UniRef100_Q52QR3 Cluster: NAC3 protein; n=1; Glycine
max|Rep: NAC3 protein - Glycine max (Soybean), partial
(64%)
Length = 1315
Score = 61.9 bits (31), Expect = 7e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 415 aaaggcaccaaaactgactggatgatgcacgagtttcgccttc 457
||||||||||||||| ||||||| |||||||||| ||||||||
Sbjct: 533 aaaggcaccaaaactaactggatcatgcacgagtatcgccttc 575