Miyakogusa Predicted Gene

Lj3g3v0397220.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0397220.1 78744_g.1
         (838 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595832                                                     345   3e-94
gnl|LJGI|TC64383                                                      335   3e-91
gnl|LJGI|TC73629 similar to UniRef100_A2Q206 Cluster: Beta tubul...    68   1e-10
gnl|LJGI|BP046665 similar to UniRef100_A2Q206 Cluster: Beta tubu...    54   1e-06

>gnl|LJGI|BW595832 
          Length = 457

 Score =  345 bits (174), Expect = 3e-94
 Identities = 280/314 (89%), Gaps = 1/314 (0%)
 Strand = Plus / Plus

                                                                       
Query: 293 attggattcttaaaattggaaatggcgaccatccagatttcggagcaggagagtacgatg 352
           |||||||||||||||||| ||||| ||| ||| | |||| ||||| ||||||||| ||||
Sbjct: 34  attggattcttaaaattgaaaatgacgatcattctgattccggagtaggagagtatgatg 93

                                                                       
Query: 353 tccaaatcccgccagatctgcttatcccaattagtcctgacccattaatggaattgatta 412
           | ||||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 94  ttcaaatccggctagatctgctcatcccaattagtccggacccattaatggaattgatta 153

                                                                       
Query: 413 aatatacatatcctgaccttgcgcacaaaatgaaagaccctcaattttttcaagataggg 472
           |||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||| |
Sbjct: 154 aatatacatatcctgacctttctcacaaaatgaaagacccgcaattctttcaagatagag 213

                                                                       
Query: 473 caatattggcacctatactagaggctgttgaaatgataaacacttacatgtttgggatga 532
            |||||| || | || |||  ||||||||||||||||||||||||||||| |||| | ||
Sbjct: 214 aaatattagctcatacactgaaggctgttgaaatgataaacacttacatgcttggcacga 273

                                                                       
Query: 533 tagctgcaccagagcatgaatatctgagctccgattctgccttgcgatctgatgaggatt 592
           ||||||||  ||| |||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 274 tagctgca-tagaacatgaatatctgagctccgactcttccttgcgatctgatgaggatt 332

                         
Query: 593 ctgaaatccaaggt 606
           ||||||||| ||||
Sbjct: 333 ctgaaatccgaggt 346


>gnl|LJGI|TC64383 
          Length = 862

 Score =  335 bits (169), Expect = 3e-91
 Identities = 347/410 (84%), Gaps = 21/410 (5%)
 Strand = Plus / Plus

                                                                       
Query: 15  ttgtttcgaagctttagacgttacactccgagatttaatgaggtcgaaagatgaagataa 74
           |||||| |||||| ||||||||||||||| |  ||||||||||| |||| ||||||| ||
Sbjct: 459 ttgttttgaagctatagacgttacactccaaagtttaatgaggttgaaaaatgaagagaa 518

                                                                       
Query: 75  cgcctataagcctttcggaggaaaattagtaatacttggaggtgattttagacaaatact 134
           ||   |||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 519 cgtacataaaccttttggaggaaaagtagtaatacctggaggtgattttagacaaatact 578

                                                                       
Query: 135 acctgtaataactagaggaagcagacaggaaatcgtcgaatctactgtaaactcttcctc 194
           ||||||||||||||||||||||                    ||||||||||||||| | 
Sbjct: 579 acctgtaataactagaggaagc--------------------tactgtaaactcttcata 618

                                                                       
Query: 195 attgtggaaacactgcaaagttatgaaattgagtaagaacatgcgcctaaccgcagctga 254
           ||||||||| || ||||||||||||||||||  |||||||||||| ||||||||| ||||
Sbjct: 619 attgtggaagcattgcaaagttatgaaattgtctaagaacatgcggctaaccgcaactga 678

                                                                       
Query: 255 gacggctgatgaagcaaaagaaatcaaagactttgcagattggattcttaaaattggaaa 314
            ||| ||||||||||||||||||||||| | |||||| |||||||||||||||||| || 
Sbjct: 679 aacgactgatgaagcaaaagaaatcaaaaagtttgcatattggattcttaaaattgaaat 738

                                                                       
Query: 315 tggcgaccatccagatttcggagcaggagagtacgatgtccaaatcccgccagatctgct 374
           ||| || ||||| ||||   ||||||||||||  ||||| ||||||| ||||||||||||
Sbjct: 739 tggtgatcatcctgattctagagcaggagagt-tgatgttcaaatcctgccagatctgct 797

                                                             
Query: 375 tatcccaattagtcctgacccattaatggaattgattaaatatacatatc 424
            |||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 798 catcccaattattcctgacccattaatgaaattgattaaatatacatatc 847


>gnl|LJGI|TC73629 similar to UniRef100_A2Q206 Cluster: Beta tubulin; n=1; Medicago
           truncatula|Rep: Beta tubulin - Medicago truncatula
           (Barrel medic), partial (25%)
          Length = 635

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 691 ataatgcttttgagaaatatagaccaagcagcaggtttatgcaatggaac 740
           ||||||||||||||||||||||  |||||| | |||||||||||||||||
Sbjct: 58  ataatgcttttgagaaatatagttcaagcatccggtttatgcaatggaac 107


>gnl|LJGI|BP046665 similar to UniRef100_A2Q206 Cluster: Beta tubulin; n=1; Medicago
           truncatula|Rep: Beta tubulin - Medicago truncatula
           (Barrel medic), partial (30%)
          Length = 524

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 686 ctccaataatgcttttgagaaatatagaccaagcagcaggtttatgcaatggaac 740
           |||| ||||||||||| ||||||||| | |||||||  ||||| |||||||||||
Sbjct: 472 ctccgataatgcttttaagaaatatatatcaagcagtcggtttttgcaatggaac 418