Miyakogusa Predicted Gene
- Lj3g3v0397180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0397180.1 Non Chatacterized Hit- tr|I1KW60|I1KW60_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26515
PE,88.13,0,seg,NULL; coiled-coil,NULL; FAMILY NOT
NAMED,NULL,CUFF.40627.1
(1014 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71422 similar to UniRef100_A7QD91 Cluster: Chromosome... 1350 0.0
gnl|LJGI|TC74807 similar to UniRef100_Q75GP1 Cluster: Expressed ... 484 e-136
gnl|LJGI|AV775596 56 4e-07
>gnl|LJGI|TC71422 similar to UniRef100_A7QD91 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (56%)
Length = 848
Score = 1350 bits (681), Expect = 0.0
Identities = 681/681 (100%)
Strand = Plus / Plus
Query: 1 atgtctcagggttcaggaaatggcgtcgatttcgacctccccgacgagattctctcggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atgtctcagggttcaggaaatggcgtcgatttcgacctccccgacgagattctctcggtt 227
Query: 61 attccgaccgacccgtatcagcagctggatctcgctcgcaagattacctccatggccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 attccgaccgacccgtatcagcagctggatctcgctcgcaagattacctccatggccatc 287
Query: 121 gcttcccgtgtctcctctcttgagtccgacaccacgcgcctccgccagaagctccttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcttcccgtgtctcctctcttgagtccgacaccacgcgcctccgccagaagctccttgag 347
Query: 181 aaggaccgcctcatcgtcgaccttgaggaccgtgtctcctccctcacccgcgcctctcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aaggaccgcctcatcgtcgaccttgaggaccgtgtctcctccctcacccgcgcctctcac 407
Query: 241 aacgctcactccgccctcaacactgccatagaagaaaatgtaaagctttccaaggagagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aacgctcactccgccctcaacactgccatagaagaaaatgtaaagctttccaaggagagg 467
Query: 301 gatgaattagcagcaacagtgaagaagctaagtcgagactttgcaaagttggagacattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gatgaattagcagcaacagtgaagaagctaagtcgagactttgcaaagttggagacattt 527
Query: 361 aaaaaacaactgatgcagtcgctagctgatgacaatccatctcaagctgaaactgtagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aaaaaacaactgatgcagtcgctagctgatgacaatccatctcaagctgaaactgtagat 587
Query: 421 atccgaacctgtgaccagtcagttccaaaggcatatcctgataaggatgatgatgggagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atccgaacctgtgaccagtcagttccaaaggcatatcctgataaggatgatgatgggagt 647
Query: 481 ggatatacgactcatcattcatacagtggccctgcagatgtgggtaaaacaattgatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ggatatacgactcatcattcatacagtggccctgcagatgtgggtaaaacaattgatgaa 707
Query: 541 gcaaccaagtattcagggcaaaggttttctatgaccccatttatcacaccacgtcttacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gcaaccaagtattcagggcaaaggttttctatgaccccatttatcacaccacgtcttacc 767
Query: 601 ccaactggaactccaaaagtgatctcaacggctgggtctccaagaggatattctgctgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ccaactggaactccaaaagtgatctcaacggctgggtctccaagaggatattctgctgct 827
Query: 661 ggatcacccaaaacttctggg 681
|||||||||||||||||||||
Sbjct: 828 ggatcacccaaaacttctggg 848
>gnl|LJGI|TC74807 similar to UniRef100_Q75GP1 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (23%)
Length = 769
Score = 484 bits (244), Expect = e-136
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 771 gcctcggggacgatcaattccaggtcgtactccaaagattgatggaaaggaattttttcg 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctcggggacgatcaattccaggtcgtactccaaagattgatggaaaggaattttttcg 60
Query: 831 tcaagccaggagtcgcctttcatatgagcagttcagtgcgttccttgctaacatcaagga 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaagccaggagtcgcctttcatatgagcagttcagtgcgttccttgctaacatcaagga 120
Query: 891 attaaatgctcaaaagcaaacgcgagaggaaactttaagaaaagcagatgagatatttgg 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaaatgctcaaaagcaaacgcgagaggaaactttaagaaaagcagatgagatatttgg 180
Query: 951 gtcagataacaaagatctttacctatcttttcaaggattgcttaaccggaatgtacgcta 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcagataacaaagatctttacctatcttttcaaggattgcttaaccggaatgtacgcta 240
Query: 1011 gttc 1014
||||
Sbjct: 241 gttc 244
>gnl|LJGI|AV775596
Length = 384
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 983 aaggattgcttaaccggaatgtacgctagttc 1014
|||||| |||||||||||||||||||||||||
Sbjct: 384 aaggatcgcttaaccggaatgtacgctagttc 353