Miyakogusa Predicted Gene
- Lj3g3v0397090.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0397090.2 Non Chatacterized Hit- tr|F6H4Q9|F6H4Q9_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,91.98,0,domain
present in cyclins, TFIIB and Retinob,Cyclin-like;
Cyclin-like,Cyclin-like; CYCLIN T,NULL; CY,CUFF.40653.2
(789 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68182 similar to UniRef100_A7QD89 Cluster: Chromosome... 618 e-176
gnl|LJGI|BP067249 similar to UniRef100_A7QD89 Cluster: Chromosom... 513 e-145
gnl|LJGI|BP034132 homologue to UniRef100_A7QD89 Cluster: Chromos... 121 7e-27
gnl|LJGI|TC59430 homologue to UniRef100_Q6EEW1 Cluster: Cyclin T... 52 5e-06
>gnl|LJGI|TC68182 similar to UniRef100_A7QD89 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 554
Score = 618 bits (312), Expect = e-176
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 1 atggctggattgttgcttggtgatatctctcatcatggatcatatcaaagtggttcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atggctggattgttgcttggtgatatctctcatcatggatcatatcaaagtggttcacaa 302
Query: 61 ggaggctctcaggacaatcaagagtatggttctcgttggtacttttctaggaaggagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggaggctctcaggacaatcaagagtatggttctcgttggtacttttctaggaaggagatc 362
Query: 121 gaagaaaattcaccttccaaacaagacggtgtagatttgaagaaagaagcttacctacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaagaaaattcaccttccaaacaagacggtgtagatttgaagaaagaagcttacctacgc 422
Query: 181 aaatcatactgtacatttctacaagacctaggcatgagacttaaagtacctcaggtaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaatcatactgtacatttctacaagacctaggcatgagacttaaagtacctcaggtaact 482
Query: 241 attgccacagcaataattttttgtcatcggttctttcttcggcaatcccatgcaaagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 attgccacagcaataattttttgtcatcggttctttcttcggcaatcccatgcaaagaat 542
Query: 301 gacaggaggatc 312
||||||||||||
Sbjct: 543 gacaggaggatc 554
>gnl|LJGI|BP067249 similar to UniRef100_A7QD89 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 499
Score = 513 bits (259), Expect = e-145
Identities = 342/371 (92%), Gaps = 9/371 (2%)
Strand = Plus / Plus
Query: 1 atggctggattgttgcttggtgatatctctcatcatggatcatatcaaagtggttcacaa 60
||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||
Sbjct: 138 atggctggattgttgcttggtgatacctctcatgatggaacacatcaaagtggttcacaa 197
Query: 61 ggaggctctcaggacaatcaagagtatggttctcgttggtacttttctaggaaggagatc 120
||| |||||||||| ||| |||||||| |||||| |||||||||| ||||||
Sbjct: 198 ggatgctctcaggagaat---------ggttctcgatggtacctttctaggaaagagatc 248
Query: 121 gaagaaaattcaccttccaaacaagacggtgtagatttgaagaaagaagcttacctacgc 180
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 249 gaagaaaactcaccttccaaacaagatggtgtagatttgaagaaagaagcttacctacgc 308
Query: 181 aaatcatactgtacatttctacaagacctaggcatgagacttaaagtacctcaggtaact 240
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 309 aaatcatactgtacatatctacaagatttaggcatgagacttaaagtacctcaggtaact 368
Query: 241 attgccacagcaataattttttgtcatcggttctttcttcggcaatcccatgcaaagaat 300
|||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 attgcctctgcaataatcttttgtcatcggttctttcttcggcaatcccatgcaaagaat 428
Query: 301 gacaggaggatcattgctaccgtgtgcatgtttcttgctgggaaggttgaagaaactcct 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 429 gacaggaggatcattgctacatcgtgcatgtttcttgctgggaaggttgaagaaactcct 488
Query: 361 cgccctctaaa 371
|||||||||||
Sbjct: 489 cgccctctaaa 499
>gnl|LJGI|BP034132 homologue to UniRef100_A7QD89 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 499
Score = 121 bits (61), Expect = 7e-27
Identities = 121/141 (85%)
Strand = Plus / Plus
Query: 157 ttgaagaaagaagcttacctacgcaaatcatactgtacatttctacaagacctaggcatg 216
||||||||||| | || || ||||| |||||||| ||||| |||| || | ||||||
Sbjct: 359 ttgaagaaagagacatatctgcgcaagtcatactgcacattcttacaggatttgggcatg 418
Query: 217 agacttaaagtacctcaggtaactattgccacagcaataattttttgtcatcggttcttt 276
||||||||||| |||||||||||||| || ||||| ||||| ||||||||||||||||||
Sbjct: 419 agacttaaagtgcctcaggtaactatagcaacagccataatattttgtcatcggttcttt 478
Query: 277 cttcggcaatcccatgcaaag 297
||||| ||||| |||||||||
Sbjct: 479 cttcgacaatctcatgcaaag 499
>gnl|LJGI|TC59430 homologue to UniRef100_Q6EEW1 Cluster: Cyclin T1; n=1; Medicago
truncatula|Rep: Cyclin T1 - Medicago truncatula (Barrel
medic), partial (32%)
Length = 752
Score = 52.0 bits (26), Expect = 5e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 646 tttaaaccccatcacattgcagctggagccatattccttgctgcgaagtt 695
|||||||||||||| |||||||||||||| ||| |||||||| |||||
Sbjct: 217 tttaaaccccatcatattgcagctggagctttatatcttgctgccaagtt 266