Miyakogusa Predicted Gene
- Lj3g3v0397090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0397090.1 Non Chatacterized Hit- tr|J3N668|J3N668_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G1,39.38,0.000000000000006,Cyclin-like,Cyclin-like;
Cyclin_N,Cyclin, N-terminal; Cyclin_C,Cyclin, C-terminal; no
description,Cy,CUFF.40653.1
(1893 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP067249 similar to UniRef100_A7QD89 Cluster: Chromosom... 718 0.0
gnl|LJGI|BP040784 weakly similar to UniRef100_Q7AKG0 Cluster: Ch... 690 0.0
gnl|LJGI|TC68182 similar to UniRef100_A7QD89 Cluster: Chromosome... 420 e-116
gnl|LJGI|TC76888 381 e-104
gnl|LJGI|DC598806 weakly similar to UniRef100_Q6A9Q3 Cluster: Ce... 297 1e-79
gnl|LJGI|BP034132 homologue to UniRef100_A7QD89 Cluster: Chromos... 113 4e-24
>gnl|LJGI|BP067249 similar to UniRef100_A7QD89 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 499
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 1 atggctggattgttgcttggtgatacctctcatgatggaacacatcaaagtggttcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atggctggattgttgcttggtgatacctctcatgatggaacacatcaaagtggttcacaa 197
Query: 61 ggatgctctcaggagaatggttctcgatggtacctttctaggaaagagatcgaagaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggatgctctcaggagaatggttctcgatggtacctttctaggaaagagatcgaagaaaac 257
Query: 121 tcaccttccaaacaagatggtgtagatttgaagaaagaagcttacctacgcaaatcatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcaccttccaaacaagatggtgtagatttgaagaaagaagcttacctacgcaaatcatac 317
Query: 181 tgtacatatctacaagatttaggcatgagacttaaagtacctcaggtaactattgcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgtacatatctacaagatttaggcatgagacttaaagtacctcaggtaactattgcctct 377
Query: 241 gcaataatcttttgtcatcggttctttcttcggcaatcccatgcaaagaatgacaggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcaataatcttttgtcatcggttctttcttcggcaatcccatgcaaagaatgacaggagg 437
Query: 301 atcattgctacatcgtgcatgtttcttgctgggaaggttgaagaaactcctcgccctcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atcattgctacatcgtgcatgtttcttgctgggaaggttgaagaaactcctcgccctcta 497
Query: 361 aa 362
||
Sbjct: 498 aa 499
>gnl|LJGI|BP040784 weakly similar to UniRef100_Q7AKG0 Cluster: Chitinase two-component
sensor kinase; n=2; Streptomyces coelicolor|Rep:
Chitinase two-component sensor kinase - Streptomyces
coelicolor, partial (6%)
Length = 521
Score = 690 bits (348), Expect = 0.0
Identities = 348/348 (100%)
Strand = Plus / Minus
Query: 1546 gtagacagatcagcttttgagaatatgcagcagggaaaacatcaagatcattcagaagag 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtagacagatcagcttttgagaatatgcagcagggaaaacatcaagatcattcagaagag 462
Query: 1606 catctccatttggtgaagccatcacatgaaacagatttaagtgctgtagaagaaggggag 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 catctccatttggtgaagccatcacatgaaacagatttaagtgctgtagaagaaggggag 402
Query: 1666 gtgtctgcacttgatgacattgacctgggacgcaagtcaagcaaccacaagaggaaagca 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gtgtctgcacttgatgacattgacctgggacgcaagtcaagcaaccacaagaggaaagca 342
Query: 1726 gagagctcccctgataaatttgcggaggggaaaaagcggcataattatagttttggatct 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gagagctcccctgataaatttgcggaggggaaaaagcggcataattatagttttggatct 282
Query: 1786 acccaccataatcgcattgattatatagaagatcaaaacaatgtcaacctgctgggacat 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 acccaccataatcgcattgattatatagaagatcaaaacaatgtcaacctgctgggacat 222
Query: 1846 gctgagagggacagcaaaaggcctgtacaggaaaaccatatttgatgc 1893
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gctgagagggacagcaaaaggcctgtacaggaaaaccatatttgatgc 174
>gnl|LJGI|TC68182 similar to UniRef100_A7QD89 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 554
Score = 420 bits (212), Expect = e-116
Identities = 286/312 (91%), Gaps = 9/312 (2%)
Strand = Plus / Plus
Query: 1 atggctggattgttgcttggtgatacctctcatgatggaacacatcaaagtggttcacaa 60
||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||
Sbjct: 243 atggctggattgttgcttggtgatatctctcatcatggatcatatcaaagtggttcacaa 302
Query: 61 ggatgctctcaggagaat---------ggttctcgatggtacctttctaggaaagagatc 111
||| |||||||||| ||| |||||||| |||||| |||||||||| ||||||
Sbjct: 303 ggaggctctcaggacaatcaagagtatggttctcgttggtacttttctaggaaggagatc 362
Query: 112 gaagaaaactcaccttccaaacaagatggtgtagatttgaagaaagaagcttacctacgc 171
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 363 gaagaaaattcaccttccaaacaagacggtgtagatttgaagaaagaagcttacctacgc 422
Query: 172 aaatcatactgtacatatctacaagatttaggcatgagacttaaagtacctcaggtaact 231
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 423 aaatcatactgtacatttctacaagacctaggcatgagacttaaagtacctcaggtaact 482
Query: 232 attgcctctgcaataatcttttgtcatcggttctttcttcggcaatcccatgcaaagaat 291
|||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 attgccacagcaataattttttgtcatcggttctttcttcggcaatcccatgcaaagaat 542
Query: 292 gacaggaggatc 303
||||||||||||
Sbjct: 543 gacaggaggatc 554
>gnl|LJGI|TC76888
Length = 497
Score = 381 bits (192), Expect = e-104
Identities = 237/252 (94%)
Strand = Plus / Plus
Query: 1631 atgaaacagatttaagtgctgtagaagaaggggaggtgtctgcacttgatgacattgacc 1690
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaagcagatttaagtgctgtagaagaaggggaggtgtctgcacttgatgacattgacc 60
Query: 1691 tgggacgcaagtcaagcaaccacaagaggaaagcagagagctcccctgataaatttgcgg 1750
|||||| ||||||||||||||| ||||| |||| |||||||||||||||||| |||| ||
Sbjct: 61 tgggacccaagtcaagcaaccagaagagaaaagtagagagctcccctgataattttgtgg 120
Query: 1751 aggggaaaaagcggcataattatagttttggatctacccaccataatcgcattgattata 1810
||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 121 aggggaaaaagcggcataattatggttccggatctacccaccataatcgcattgattata 180
Query: 1811 tagaagatcaaaacaatgtcaacctgctgggacatgctgagagggacagcaaaaggcctg 1870
||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 181 tagaagatcgaaacaaggtcaaccggctgggacatgctgagagggacagcaaaaggcata 240
Query: 1871 tacaggaaaacc 1882
||||||||||||
Sbjct: 241 tacaggaaaacc 252
>gnl|LJGI|DC598806 weakly similar to UniRef100_Q6A9Q3 Cluster: Cell division protein
FtsW; n=1; Propionibacterium acnes|Rep: Cell division
protein FtsW - Propionibacterium acnes, partial (4%)
Length = 566
Score = 297 bits (150), Expect = 1e-79
Identities = 322/378 (85%), Gaps = 6/378 (1%)
Strand = Plus / Plus
Query: 769 caaatgctggagctatatgaacaaaatcaaatagcgccatcaaatgatgttgaaggaact 828
|||||||||||||||||||||||||| | ||| || | ||||||||||||||||||||
Sbjct: 1 caaatgctggagctatatgaacaaaaccgaatggcacagtcaaatgatgttgaaggaacc 60
Query: 829 gcaggaggtggcaacagggcaacgccaaaagcatcaactagcaatgatgaagctgcaacc 888
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 61 acaggaggtggcaacagggcaactccaaaagctccaactagcaatgatgaagctgcatcc 120
Query: 889 acaaacaacaatttgtatatccgaggtccaagtccaagacttgaagcatcaaaactcgca 948
||||||| |||||| ||||| ||||||||||| ||| ||||||| ||||||||| |||
Sbjct: 121 acaaacagaaatttgcatatcggaggtccaagttcaacacttgaaacatcaaaacctgca 180
Query: 949 atatccaaaaatg---ttgtatcatctgcaaatcatgttg---gccctgtatcaaatcac 1002
| ||| ||||||| |||| |||||||| |||||||| | |||||||||| |||||
Sbjct: 181 acatctaaaaatgtttttgtgtcatctgctaatcatgtgggacgccctgtatcgaatcat 240
Query: 1003 ggcacaaatggaagcacagaaatgatacacttggtggaaggtgatgccaagggaaatcaa 1062
|| || ||||||||| ||| ||| |||| |||||||| ||||| ||| || |||| |
Sbjct: 241 ggtgtaagtggaagcaccgaagtgaaacacccggtggaagatgatgtcaaaggcaatcta 300
Query: 1063 catcctgagcaggaacctccaccacataaggaaaacttgcaggaagctcaagacacggtg 1122
|||||| | ||||||||| || || || |||||||| |||||||||||||||||| ||||
Sbjct: 301 catcctaaacaggaaccttcagcatatgaggaaaacatgcaggaagctcaagacatggtg 360
Query: 1123 agatctcgatcaggttat 1140
||||||||||||||||||
Sbjct: 361 agatctcgatcaggttat 378
Score = 180 bits (91), Expect = 2e-44
Identities = 165/189 (87%), Gaps = 3/189 (1%)
Strand = Plus / Plus
Query: 1041 aggtgatgccaagggaaatcaacatcctgagcaggaacctccaccacataaggaaaactt 1100
|||| ||||||| || |||||||||||| ||||||||||| || || || ||||||| |
Sbjct: 372 aggttatgccaaaggtaatcaacatcctaagcaggaaccttcaacatatgaggaaaaaat 431
Query: 1101 gcaggaagctcaagacacggtgagatctcgatcaggttatagtgaggagcctgaaatcaa 1160
||||||||||||||||| |||||||||||||||||||||| | | |||| || | |||
Sbjct: 432 gcaggaagctcaagacatggtgagatctcgatcaggttatggcaaagagcaagagagcaa 491
Query: 1161 cattgggagaagcaacat---gaaggaagatgttgaattgaatgataaacatagcagcaa 1217
| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgttgggagaagcaacattaaggaggaagatgttgaattgaatgataaacatagcagcaa 551
Query: 1218 gaacctaaa 1226
|||||||||
Sbjct: 552 gaacctaaa 560
>gnl|LJGI|BP034132 homologue to UniRef100_A7QD89 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 499
Score = 113 bits (57), Expect = 4e-24
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 148 ttgaagaaagaagcttacctacgcaaatcatactgtacatatctacaagatttaggcatg 207
||||||||||| | || || ||||| |||||||| |||| |||| ||||| ||||||
Sbjct: 359 ttgaagaaagagacatatctgcgcaagtcatactgcacattcttacaggatttgggcatg 418
Query: 208 agacttaaagtacctcaggtaactattgcctctgcaataatcttttgtcatcggttcttt 267
||||||||||| |||||||||||||| || | || ||||| ||||||||||||||||||
Sbjct: 419 agacttaaagtgcctcaggtaactatagcaacagccataatattttgtcatcggttcttt 478
Query: 268 cttcggcaatcccatgcaaag 288
||||| ||||| |||||||||
Sbjct: 479 cttcgacaatctcatgcaaag 499