Miyakogusa Predicted Gene
- Lj3g3v0392830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0392830.1 tr|G7L986|G7L986_MEDTR Cysteine-rich
receptor-like protein kinase OS=Medicago truncatula
GN=MTR_8g05,65.23,0,PROTEIN_KINASE_ST,Serine/threonine-protein kinase,
active site; Bulb-type mannose-specific lectin,Bu,CUFF.40609.1
(2079 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW600212 similar to UniRef100_Q19MB0 Cluster: S recepto... 387 e-106
gnl|LJGI|BW596731 similar to UniRef100_Q5NJB1 Cluster: S-recepto... 268 1e-70
gnl|LJGI|DC594079 similar to UniRef100_A7QKK5 Cluster: Chromosom... 58 2e-07
gnl|LJGI|NP840531 GB|AJ580824.1|CAE45595.1 S-receptor kinase-lik... 56 9e-07
gnl|LJGI|TC81772 UniRef100_Q70I29 Cluster: S-receptor kinase-lik... 56 9e-07
>gnl|LJGI|BW600212 similar to UniRef100_Q19MB0 Cluster: S receptor kinase SRK37; n=1;
Arabidopsis lyrata|Rep: S receptor kinase SRK37 -
Arabidopsis lyrata (Lyre-leaved rock-cress), partial (8%)
Length = 616
Score = 387 bits (195), Expect = e-106
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1726 aaaattatccacagagatttgaaggctagtaacatactccttgatgagaatatgaaccca 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaaattatccacagagatttgaaggctagtaacatactccttgatgagaatatgaaccca 481
Query: 1786 aaaatttctgattttggtgtcgcgagaatgtttacgaaacaagaaactgaatcaaatacc 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaaatttctgattttggtgtcgcgagaatgtttacgaaacaagaaactgaatcaaatacc 541
Query: 1846 aacaggattgttgggacatacggttacatgtctccagagtatgccatggaaggagttttc 1905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aacaggattgttgggacatacggttacatgtctccagagtatgccatggaaggagttttc 601
Query: 1906 tctacaaagtctgat 1920
|||||||||||||||
Sbjct: 602 tctacaaagtctgat 616
>gnl|LJGI|BW596731 similar to UniRef100_Q5NJB1 Cluster: S-receptor kinase-like protein
1; n=1; Senecio squalidus|Rep: S-receptor kinase-like
protein 1 - Senecio squalidus (Oxford ragwort), partial
(8%)
Length = 486
Score = 268 bits (135), Expect = 1e-70
Identities = 141/143 (98%)
Strand = Plus / Plus
Query: 1485 tgaatttaaaaacgaattaacactcatatctaagcttcaacatacaaatctcgtacagct 1544
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 tgaatttaaaaacgaattaacactcatatctaactttcaacatacaaatctcgtacagct 69
Query: 1545 actcggtcactgcattcatcaacaagagcggatgttggtctatgagtatatgtcaaacaa 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 actcggtcactgcattcatcaacaagagcggatgttggtctatgagtatatgtcaaacaa 129
Query: 1605 aagcttggactgttttttatttg 1627
|||||||||||||||||||||||
Sbjct: 130 aagcttggactgttttttatttg 152
Score = 75.8 bits (38), Expect = 1e-12
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1627 gatgcttctggaagagagttgctagattggagcaagcg 1664
||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gatgcttctggaagagagttgctagattggagcaagcg 486
>gnl|LJGI|DC594079 similar to UniRef100_A7QKK5 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 583
Score = 58.0 bits (29), Expect = 2e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1471 ggacaaggagctattgaatttaaaaacgaattaacactcatatctaagcttcaacataca 1530
|||||||||||||| |||||||| ||||| | ||||||||| | || |||||||||| |
Sbjct: 374 ggacaaggagctatagaatttaagaacgagattacactcatagccaaacttcaacataga 433
Query: 1531 aatct 1535
|||||
Sbjct: 434 aatct 438
>gnl|LJGI|NP840531 GB|AJ580824.1|CAE45595.1 S-receptor kinase-like protein 2 [Lotus
corniculatus var. japonicus]
Length = 2598
Score = 56.0 bits (28), Expect = 9e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 1732 atccacagagatttgaaggctagtaacatactccttgatgagaatatgaacccaaaaatt 1791
|||||||||||| |||| |||||||||| || |||||||| | ||||||||||| ||
Sbjct: 2020 atccacagagatctgaaaactagtaacattcttcttgatgatgaaatgaacccaaagata 2079
Query: 1792 tctgattttggt 1803
|| |||||||||
Sbjct: 2080 tcagattttggt 2091
>gnl|LJGI|TC81772 UniRef100_Q70I29 Cluster: S-receptor kinase-like protein 2; n=1;
Lotus japonicus|Rep: S-receptor kinase-like protein 2 -
Lotus japonicus, complete
Length = 3378
Score = 56.0 bits (28), Expect = 9e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 1732 atccacagagatttgaaggctagtaacatactccttgatgagaatatgaacccaaaaatt 1791
|||||||||||| |||| |||||||||| || |||||||| | ||||||||||| ||
Sbjct: 2452 atccacagagatctgaaaactagtaacattcttcttgatgatgaaatgaacccaaagata 2511
Query: 1792 tctgattttggt 1803
|| |||||||||
Sbjct: 2512 tcagattttggt 2523