Miyakogusa Predicted Gene

Lj3g3v0381660.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0381660.1 tr|I4KE75|I4KE75_PSEFL Peptidase, M23 family
OS=Pseudomonas fluorescens SS101 PE=4
SV=1,37.25,9.4,seg,NULL,CUFF.40622.1
         (207 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV781024 similar to UniRef100_UPI000049835C Cluster: hi...   355   7e-98
gnl|LJGI|TC78497 homologue to UniRef100_Q5MFB2 Cluster: Cytochro...   319   4e-87
gnl|LJGI|TC82219 similar to UniRef100_UPI000049835C Cluster: hig...   125   1e-28
gnl|LJGI|TC78909                                                       96   1e-19

>gnl|LJGI|AV781024 similar to UniRef100_UPI000049835C Cluster: high mobility group
           protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: high
           mobility group protein - Entamoeba histolytica
           HM-1:IMSS, partial (13%)
          Length = 585

 Score =  355 bits (179), Expect = 7e-98
 Identities = 200/207 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtagtttgggtggggttgaaaggacacgatgcccaactaggtgacaaagaagcaagg 60
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 376 atggtagttggggtggggttgaaaggacacgatgcccaagtaggtgacaaagaagcaagg 435

                                                                       
Query: 61  ttgatgactcatttgaagaggttgcaaagattggtattttttattttacccacgggaaag 120
           ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 436 ttgatgactcattggaagaggttgcagagattggtattttttattttacccacgggaaag 495

                                                                       
Query: 121 aagcaaagtatgatccaaacaggcctaagagacctccattctcattcctctaattcagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aagcaaagtatgatccaaacaggcctaagagacctccattctcattcctctaattcagga 555

                                      
Query: 181 aatcacttcaactggcgtgtctagaag 207
           |||||||   |||||||||||||||||
Sbjct: 556 aatcactgtcactggcgtgtctagaag 582


>gnl|LJGI|TC78497 homologue to UniRef100_Q5MFB2 Cluster: Cytochrome c biogenesis
           ccmB; n=1; Amborella trichopoda|Rep: Cytochrome c
           biogenesis ccmB - Amborella trichopoda, partial (8%)
          Length = 1090

 Score =  319 bits (161), Expect = 4e-87
 Identities = 171/173 (98%), Gaps = 1/173 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtagtttgggtggggttgaaaggacacgatgcccaactaggtgacaaagaagcaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atggtagtttgggtggggttgaaaggacacgatgcccaactaggtgacaaagaagcaagg 540

                                                                       
Query: 61  ttgatgactcatttgaagaggttgcaaagattggtattttttattttacccacgggaaag 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 ttgatgactcatttgaagaggttgcaaagattggta-tttttattttacccacgggaaag 599

                                                                
Query: 121 aagcaaagtatgatccaaacaggcctaagagacctccattctcattcctctaa 173
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 600 aagcaaagtatgatccaaacaggtctaagagacctccattctcattcctctaa 652


>gnl|LJGI|TC82219 similar to UniRef100_UPI000049835C Cluster: high mobility group
           protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: high
           mobility group protein - Entamoeba histolytica
           HM-1:IMSS, partial (13%)
          Length = 525

 Score =  125 bits (63), Expect = 1e-28
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                       
Query: 113 cgggaaagaagcaaagtatgatccaaacaggcctaagagacctccattctcattcctcta 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgggaaagaagcaaagtatgatccaaacaggcctaagagacctccattctcattcctcta 60

              
Query: 173 att 175
           |||
Sbjct: 61  att 63


>gnl|LJGI|TC78909 
          Length = 1162

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 128 gtatgatccaaacaggcctaagagacctccattctcattcctctaatt 175
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtatgatccaaacaggcctaagagacctccattctcattcctctaatt 48