Miyakogusa Predicted Gene

Lj3g3v0339010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0339010.1 Non Chatacterized Hit- tr|D5A923|D5A923_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,34.67,3e-18,seg,NULL,CUFF.40547.1
         (519 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI418990 weakly similar to UniRef100_Q77IW3 Cluster: OR...   900   0.0  

>gnl|LJGI|BI418990 weakly similar to UniRef100_Q77IW3 Cluster: ORF91; n=3;
           Nucleopolyhedrovirus|Rep: ORF91 - Helicoverpa zea SNPV,
           partial (35%)
          Length = 454

 Score =  900 bits (454), Expect = 0.0
 Identities = 454/454 (100%)
 Strand = Plus / Plus

                                                                       
Query: 2   tggggttaggggcatcaaagcgagtgaacaacagtctacgcaactcgtcccaattcaact 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggggttaggggcatcaaagcgagtgaacaacagtctacgcaactcgtcccaattcaact 60

                                                                       
Query: 62  cagcatgcgactcagcgttcacccactgcctctccctaacccagcacgcctacgacggcg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cagcatgcgactcagcgttcacccactgcctctccctaacccagcacgcctacgacggcg 120

                                                                       
Query: 122 tcctcccttaccaactcaaaaccgcttccgatcacatccacaccctcctcctctccgaca 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctcccttaccaactcaaaaccgcttccgatcacatccacaccctcctcctctccgaca 180

                                                                       
Query: 182 ccaacccccacccactcatccacaagtgggtcgcaactccccctgaccgctcccaagttg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaacccccacccactcatccacaagtgggtcgcaactccccctgaccgctcccaagttg 240

                                                                       
Query: 242 actccgccctccgccgcgtgaaccaccgcggcgaaaccctcggatccgcccccttcaagg 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actccgccctccgccgcgtgaaccaccgcggcgaaaccctcggatccgcccccttcaagg 300

                                                                       
Query: 302 attgggctcacgagctctacactgatgccgtggtggccggtgctggcaaagcgcttatgc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgggctcacgagctctacactgatgccgtggtggccggtgctggcaaagcgcttatgc 360

                                                                       
Query: 362 tgcgagttccggtcggtgtcgccgggattgttggaatcggcgcactcgctcgccctgctc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcgagttccggtcggtgtcgccgggattgttggaatcggcgcactcgctcgccctgctc 420

                                             
Query: 422 cggtggtgatcggaagcttcgtcggagcttactc 455
           ||||||||||||||||||||||||||||||||||
Sbjct: 421 cggtggtgatcggaagcttcgtcggagcttactc 454