Miyakogusa Predicted Gene
- Lj3g3v0338970.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0338970.3 tr|G7IS22|G7IS22_MEDTR Nuclear transcription
factor Y subunit A-3 OS=Medicago truncatula
GN=MTR_2g09,60.64,0,TRANSCRIPTION FACTOR NF-Y
ALPHA-RELATED,CCAAT-binding transcription factor, subunit B;
NFYA_HAP2_2,C,CUFF.40552.3
(945 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP063680 442 e-123
gnl|LJGI|DC593102 406 e-112
gnl|LJGI|DC595966 64 2e-09
gnl|LJGI|TC70895 similar to UniRef100_A7P6L4 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|BP063680
Length = 486
Score = 442 bits (223), Expect = e-123
Identities = 227/229 (99%)
Strand = Plus / Plus
Query: 1 atgaagtgtttatgtgagaaggaccctggtctatgttctgctcatccatcatccacccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atgaagtgtttatgtgagaaggaccctggtctatgttctgctcatccatcatccacccat 317
Query: 61 gttcttggaggcccatcatgggcaacttcttctgaatctgaagtcccacattcctctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttcttggaggcccatcatgggcaacttcttctgaatctgaagtcccacattcctctatc 377
Query: 121 tccaacagtttgagcttgaaagtggatgttctgccacagcaatgccacaagagcaaggca 180
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 378 tccaacagtttgagcttgaaagtggatgttctgncacagcaatgncacaagagcaaggca 437
Query: 181 ctgagttttcaattccaagaacaggattcatcttcatctcaatcatctg 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctgagttttcaattccaagaacaggattcatcttcatctcaatcatctg 486
>gnl|LJGI|DC593102
Length = 449
Score = 406 bits (205), Expect = e-112
Identities = 205/205 (100%)
Strand = Plus / Minus
Query: 741 ttcaccaaaccacggccttaaattttccggctctactcgtttgaatttgagtggaaatgt 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttcaccaaaccacggccttaaattttccggctctactcgtttgaatttgagtggaaatgt 390
Query: 801 gccagaatctaatgaaacccatcatcaggactcagatttcaggttatgcagttacccttc 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gccagaatctaatgaaacccatcatcaggactcagatttcaggttatgcagttacccttc 330
Query: 861 tcacactggaaggaacatgcaggattataccgtcgataagggcggtggtggtgcgaatca 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcacactggaaggaacatgcaggattataccgtcgataagggcggtggtggtgcgaatca 270
Query: 921 acgccgactatctgtcctcatgtga 945
|||||||||||||||||||||||||
Sbjct: 269 acgccgactatctgtcctcatgtga 245
>gnl|LJGI|DC595966
Length = 474
Score = 63.9 bits (32), Expect = 2e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 213 ttcatctcaatcatctggtcaatcttatcccgaagttggatctgcacaatcaggtcaaat 272
|||| |||||||| | || ||||||||||| ||||||| || |||||||||||||||||
Sbjct: 384 ttcaactcaatcaacagggcaatcttatccgaaagttggttcagcacaatcaggtcaaat 443
Query: 273 ttct 276
||||
Sbjct: 444 ttct 447
>gnl|LJGI|TC70895 similar to UniRef100_A7P6L4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 645
Score = 54.0 bits (27), Expect = 2e-06
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 666 acatgcattgaagagagctagaggtgttggcggccgcttcctcaacactaaacaactcga 725
||||||| |||| |||||||||||| |||||| || ||||| ||||| ||| | ||| |
Sbjct: 1 acatgcaatgaaaagagctagaggttctggcggacgtttcctgaacacaaaaaagctcca 60
Query: 726 agaatcaaagcttacttca 744
||| |||||||| ||||||
Sbjct: 61 agagtcaaagctcacttca 79