Miyakogusa Predicted Gene
- Lj3g3v0338910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0338910.1 tr|G7IS24|G7IS24_MEDTR Threonine synthase
OS=Medicago truncatula GN=MTR_2g099510 PE=4 SV=1,91.23,0,Tryptophan
synthase beta subunit-like PLP-dependent enzymes,Tryptophan synthase
beta subunit-like PL,NODE_32551_length_1834_cov_198.504913.path2.1
(1029 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61513 homologue to UniRef100_A7P5Z1 Cluster: Chromoso... 1104 0.0
gnl|LJGI|TC58157 similar to UniRef100_Q9MT28 Cluster: Threonine ... 906 0.0
gnl|LJGI|TC72961 similar to UniRef100_Q2Q021 Cluster: Threonine ... 248 6e-65
gnl|LJGI|TC71416 homologue to UniRef100_Q9MT28 Cluster: Threonin... 165 7e-40
>gnl|LJGI|TC61513 homologue to UniRef100_A7P5Z1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (60%)
Length = 1213
Score = 1104 bits (557), Expect = 0.0
Identities = 572/577 (99%)
Strand = Plus / Plus
Query: 1 atgaacgatctctgggtcaagcactgcggaatcagccacaccggaagcttcaaggatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atgaacgatctctgggtcaagcactgcggaatcagccacaccggaagcttcaaggatctg 696
Query: 61 ggcatgacggttctcgtcagccaggttaaccgcctgagaaaaatgaaccgccctgtaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ggcatgacggttctcgtcagccaggttaaccgcctgagaaaaatgaaccgccctgtaatc 756
Query: 121 ggcgttggatgcgcctccaccggcgacacctcggctgccctctcagcctactgcgcctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ggcgttggatgcgcctccaccggcgacacctcggctgccctctcagcctactgcgcctcc 816
Query: 181 gctgggatcccctccattgtgtttctcccggcgaacagaatctccattgctcagctggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gctgggatcccctccattgtgtttctcccggcgaacagaatctccattgctcagctggtt 876
Query: 241 cagccaattgccaatggggcatttgttctcagcatcgacaccgatttcgacggctgtatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 cagccaattgccaatggggcatttgttctcagcatcgacaccgatttcgacggctgtatg 936
Query: 301 aatctgattcgcgaggtgacggcagagcatccgatttacctcgcgaattcgctgaatagt 360
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 937 catctgattcgcgaggtgacggcagagcttccgatttacctcgcgaattcgctgaatagt 996
Query: 361 ttgaggcttgaagggcagaaaaatgctgcaattgagattttgcagcagtttgattggcag 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 997 ttgaggcttgaagggcagaaaactgctgcaattgagattttgcagcagtttgattggcag 1056
Query: 421 gttcctgattgggtgattatccctggtgggaaccttgggaatatctatgctttttacaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 gttcctgattgggtgattatccctggtgggaaccttgggaatatctatgctttttacaaa 1116
Query: 481 gggtttcaaatgtgtaaagagcttgggcttgtggataaaattccaaggcttgtttgtgct 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 gggtttcaaatgtataaagagcttgggcttgtggataaaattccaaggcttgtttgtgct 1176
Query: 541 caggctgcaaatgcaaaccctttgtatacctacttta 577
|| ||||||||||||||||||||||||||||||||||
Sbjct: 1177 caagctgcaaatgcaaaccctttgtatacctacttta 1213
>gnl|LJGI|TC58157 similar to UniRef100_Q9MT28 Cluster: Threonine synthase, chloroplast
precursor; n=1; Solanum tuberosum|Rep: Threonine
synthase, chloroplast precursor - Solanum tuberosum
(Potato), partial (30%)
Length = 815
Score = 906 bits (457), Expect = 0.0
Identities = 481/489 (98%)
Strand = Plus / Plus
Query: 541 caggctgcaaatgcaaaccctttgtatacctactttaagtcagggtggaaggaggttcag 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 caggctgcaaatgcaaaccctttgtatacctactttaagtcagggtggaaggagtttcag 60
Query: 601 ccgatgacggcgaagaaaaattttgcttccgccattcagaatggagaccctgtttcaatt 660
|||||||||||||||| | ||||||||| || ||||||| ||| |||||||||||||||
Sbjct: 61 ccgatgacggcgaagactacttttgcttctgctattcagattggtgaccctgtttcaatt 120
Query: 661 gacagggctgtgcttgcattgaagaattctaatgggattgttgaggaagctactgaggag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacagggctgtgcttgcattgaagaattctaatgggattgttgaggaagctactgaggag 180
Query: 721 gagttgatggatgctatggctcaagctgattccactggcatgtttgcttgtcctcatact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagttgatggatgctatggctcaagctgattccactggcatgtttgcttgtcctcatact 240
Query: 781 ggggttgctttggctgcattgtttaagctgaggaactctggggttatcaagcctactgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggggttgctttggctgcattgtttaagctgaggaactctggggttatcaagcctactgat 300
Query: 841 aggactgttgtggtgagcactgctcatgggttgaagttcactcagtctaagattgattac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggactgttgtggtgagcactgctcatgggttgaagttcactcagtctaagattgattac 360
Query: 901 cattctgggcatattaaggacatggcttgccagtttgcgaatccgccgctgcaagtgaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cattctgggcatattaaggacatggcttgccagtttgcgaatccgccgctgcaagtgaag 420
Query: 961 gctgactttgggtctgttatggatgttttgaagaagtatttgaagagcaaggctccaaag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgactttgggtctgttatggatgttttgaagaagtatttgaagagcaaggctccaaag 480
Query: 1021 aatcattag 1029
|||||||||
Sbjct: 481 aatcattag 489
>gnl|LJGI|TC72961 similar to UniRef100_Q2Q021 Cluster: Threonine synthase; n=1;
Glycine max|Rep: Threonine synthase - Glycine max
(Soybean), partial (63%)
Length = 1142
Score = 248 bits (125), Expect = 6e-65
Identities = 671/853 (78%)
Strand = Plus / Plus
Query: 26 gcggaatcagccacaccggaagcttcaaggatctgggcatgacggttctcgtcagccagg 85
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 3 gcggcatcagccacaccggaagcttcaaggatctcggcatgacggttctcgtcagccaag 62
Query: 86 ttaaccgcctgagaaaaatgaaccgccctgtaatcggcgttggatgcgcctccaccggcg 145
| |||||||| | | ||||||||| || | ||||||| || ||||||||||||||||
Sbjct: 63 taaaccgcctccgtagaatgaaccgtcccctcgtcggcgtcgggtgcgcctccaccggcg 122
Query: 146 acacctcggctgccctctcagcctactgcgcctccgctgggatcccctccattgtgtttc 205
|||| || || || ||||| |||||||||||| |||| || ||||| |||||||| || |
Sbjct: 123 acacatccgccgcgctctccgcctactgcgccgccgcgggaatcccatccattgtcttcc 182
Query: 206 tcccggcgaacagaatctccattgctcagctggttcagccaattgccaatggggcatttg 265
|||||| |||| ||||||| || |||||| |||| || || |||| || || | |
Sbjct: 183 tcccggacaacaagatctccaccgcgcagctgattcaacctgtttccaacggcgctctgg 242
Query: 266 ttctcagcatcgacaccgatttcgacggctgtatgaatctgattcgcgaggtgacggcag 325
|||||||||||| |||||| ||||||||||| ||||| | || || || | || || |
Sbjct: 243 ttctcagcatcgccaccgacttcgacggctgcatgaaattaatccgggaaatcaccgccg 302
Query: 326 agcatccgatttacctcgcgaattcgctgaatagtttgaggcttgaagggcagaaaaatg 385
||| ||| || ||||||||||| ||||| || || ||||| | || |||||||||| |
Sbjct: 303 agcttccaatctacctcgcgaactcgctcaacagcttgagaatcgaggggcagaaaaccg 362
Query: 386 ctgcaattgagattttgcagcagtttgattggcaggttcctgattgggtgattatccctg 445
| || ||||||||| | |||||||| | ||| ||||||||||||||||||| | || |
Sbjct: 363 ccgccattgagattcttcagcagttcaactgggaggttcctgattgggtgatcgttcccg 422
Query: 446 gtgggaaccttgggaatatctatgctttttacaaagggtttcaaatgtgtaaagagcttg 505
| |||||||| || || ||||| || || ||||| ||||| | ||||| || || || |
Sbjct: 423 gcgggaacctcggcaacatctacgccttctacaaggggttcaagatgtgcaaggatctcg 482
Query: 506 ggcttgtggataaaattccaaggcttgtttgtgctcaggctgcaaatgcaaaccctttgt 565
| || ||||| || ||||| | || |||||||||||||| || ||||| || ||| |||
Sbjct: 483 gcctcgtggagaagattcctcgactggtttgtgctcaggcggcgaatgcgaatcctctgt 542
Query: 566 atacctactttaagtcagggtggaaggaggttcagccgatgacggcgaagaaaaattttg 625
|| |||| || || |||||||||||| | || |||| | |||| | | | || |
Sbjct: 543 atcgatactacaaatctgggtggaaggagttcaaggcgattaaggcggaaaccacattcg 602
Query: 626 cttccgccattcagaatggagaccctgtttcaattgacagggctgtgcttgcattgaaga 685
|||| || ||||||| ||| ||||| ||||| ||||||||||| |||| ||| ||||||
Sbjct: 603 cttcggcgattcagattggtgacccggtttcgattgacagggcggtgcatgcgctgaaga 662
Query: 686 attctaatgggattgttgaggaagctactgaggaggagttgatggatgctatggctcaag 745
|| | ||||||||| ||||| || || ||||||||| |||||||||| ||||| |
Sbjct: 663 gttgtggtgggattgtggaggaggcgacggaggaggagctgatggatgcgatggcgttgg 722
Query: 746 ctgattccactggcatgtttgcttgtcctcatactggggttgctttggctgcattgttta 805
| ||||| ||||| |||||| ||| || ||||||||||| |||||| | ||| || |
Sbjct: 723 cggattcgactgggatgtttatttgcccgcatactggggtggctttgacggcactgacga 782
Query: 806 agctgaggaactctggggttatcaagcctactgataggactgttgtggtgagcactgctc 865
||||||| ||||| ||||| || | | ||||||| | || ||||||||||| || |
Sbjct: 783 agctgagaaactccggggtgattgcggcgggtgatagggcggtggtggtgagcaccgcgc 842
Query: 866 atgggttgaagtt 878
|||||||||||||
Sbjct: 843 atgggttgaagtt 855
>gnl|LJGI|TC71416 homologue to UniRef100_Q9MT28 Cluster: Threonine synthase,
chloroplast precursor; n=1; Solanum tuberosum|Rep:
Threonine synthase, chloroplast precursor - Solanum
tuberosum (Potato), partial (4%)
Length = 517
Score = 165 bits (83), Expect = 7e-40
Identities = 156/178 (87%), Gaps = 8/178 (4%)
Strand = Plus / Plus
Query: 858 cactgctc-atgggttgaagttcactcagtctaagattgattaccattctgggcatatta 916
|||||||| |||||||||||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 145 cactgctctatgggttgaagttcactcagtccaaaattgattaccattctaagaatatta 204
Query: 917 aggacatggcttg-ccagtttgcgaatccgccgctgcaagtgaaggctgactttg----- 970
||||||||||||| ||| ||| | || || || ||||||||||||||| ||||||
Sbjct: 205 aggacatggcttggccaatttcccaacccaccactgcaagtgaaggcttactttgtcttt 264
Query: 971 -ggtctgttatggatgttttgaagaagtatttgaagagcaaggctccaaagaatcatt 1027
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 gggtctattatggatgttttgaagaagtatttgaagagcaagtctccaaagaatcatt 322