Miyakogusa Predicted Gene
- Lj3g3v0336700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0336700.1 tr|G7IS24|G7IS24_MEDTR Threonine synthase
OS=Medicago truncatula GN=MTR_2g099510 PE=4 SV=1,84.14,0,thrC:
threonine synthase,Threonine synthase-like; PALP,Tryptophan synthase
beta subunit-like PLP-dep,CUFF.40632.1
(1585 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61513 homologue to UniRef100_A7P5Z1 Cluster: Chromoso... 1863 0.0
gnl|LJGI|TC58157 similar to UniRef100_Q9MT28 Cluster: Threonine ... 971 0.0
gnl|LJGI|TC73038 similar to UniRef100_A7P5Z1 Cluster: Chromosome... 468 e-131
gnl|LJGI|TC72961 similar to UniRef100_Q2Q021 Cluster: Threonine ... 295 4e-79
gnl|LJGI|TC71416 homologue to UniRef100_Q9MT28 Cluster: Threonin... 165 1e-39
gnl|LJGI|TC69973 homologue to UniRef100_Q2Q021 Cluster: Threonin... 145 1e-33
>gnl|LJGI|TC61513 homologue to UniRef100_A7P5Z1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (60%)
Length = 1213
Score = 1863 bits (940), Expect = 0.0
Identities = 946/948 (99%)
Strand = Plus / Plus
Query: 185 tccgcgacgaagctcgccgcaagaaaatctccaccggcgaccgccacctcttctccgcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tccgcgacgaagctcgccgcaagaaaatctccaccggcgaccgccacctcttctccgcca 325
Query: 245 aatacgtccccttcaacgccgacccatcctccaccgaatcctactccctcgacgaggtcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aatacgtccccttcaacgccgacccatcctccaccgaatcctactccctcgacgaggtcg 385
Query: 305 tctaccgctcccaatccggcggcctcctcgacgtccagcacgacatcgccgccctcaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctaccgctcccaatccggcggcctcctcgacgtccagcacgacatcgccgccctcaaag 445
Query: 365 ccttcgacggcgaacactggcgcaacctcttcgactcccgcgtcggtaaaaccacctggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccttcgacggcgaacactggcgcaacctcttcgactcccgcgtcggtaaaaccacctggc 505
Query: 425 cctacggctccggcgtctggagcaagaaggagtgggtcctccctgagatcgacgacgacg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cctacggctccggcgtctggagcaagaaggagtgggtcctccctgagatcgacgacgacg 565
Query: 485 acatcgtctccgccttcgaaggtaactccaacctcttctgggctgaacgattcggcaaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 acatcgtctccgccttcgaaggtaactccaacctcttctgggctgaacgattcggcaaac 625
Query: 545 gcttcgtcgacatgaacgatctctgggtcaagcactgcggaatcagccacaccggaagct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gcttcgtcgacatgaacgatctctgggtcaagcactgcggaatcagccacaccggaagct 685
Query: 605 tcaaggatctgggcatgacggttctcgtcagccaggttaaccgcctgagaaaaatgaacc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tcaaggatctgggcatgacggttctcgtcagccaggttaaccgcctgagaaaaatgaacc 745
Query: 665 gccctgtaatcggcgttggatgcgcctccaccggcgacacctcggctgccctctcagcct 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gccctgtaatcggcgttggatgcgcctccaccggcgacacctcggctgccctctcagcct 805
Query: 725 actgcgcctccgctgggatcccctccattgtgtttctcccggcgaacagaatctccattg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 actgcgcctccgctgggatcccctccattgtgtttctcccggcgaacagaatctccattg 865
Query: 785 ctcagctggttcagccaattgccaatggggcatttgttctcagcatcgacaccgatttcg 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 ctcagctggttcagccaattgccaatggggcatttgttctcagcatcgacaccgatttcg 925
Query: 845 acggctgtatgcatctgattcgcgaggtgacggcagagcttccgatttacctcgcgaatt 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 acggctgtatgcatctgattcgcgaggtgacggcagagcttccgatttacctcgcgaatt 985
Query: 905 cgctgaatagtttgaggcttgaagggcagaaaactgctgcaattgagattttgcagcagt 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 cgctgaatagtttgaggcttgaagggcagaaaactgctgcaattgagattttgcagcagt 1045
Query: 965 ttgattggcaggttcctgattgggtgattatccctggtgggaaccttgggaatatctatg 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 ttgattggcaggttcctgattgggtgattatccctggtgggaaccttgggaatatctatg 1105
Query: 1025 ctttttacaaagggtttcaaatgtgtaaagagcttgggcttgtggataaaattccaaggc 1084
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1106 ctttttacaaagggtttcaaatgtataaagagcttgggcttgtggataaaattccaaggc 1165
Query: 1085 ttgtttgtgctcaggctgcaaatgcaaaccctttgtatacctacttta 1132
||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1166 ttgtttgtgctcaagctgcaaatgcaaaccctttgtatacctacttta 1213
Score = 155 bits (78), Expect = 1e-36
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 1 atggcttcttcttcctcaaccctctttcaatcctcctcgnnnnnnnccggcggttttcca 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 82 atggcttcttcttcctcaaccctctttcaatcctcctcgtttttttccggcggttttcca 141
Query: 61 ctgccacctccccaacgcaaacgtaaaacccatttccac 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ctgccacctccccaacgcaaacgtaaaacccatttccac 180
>gnl|LJGI|TC58157 similar to UniRef100_Q9MT28 Cluster: Threonine synthase, chloroplast
precursor; n=1; Solanum tuberosum|Rep: Threonine
synthase, chloroplast precursor - Solanum tuberosum
(Potato), partial (30%)
Length = 815
Score = 971 bits (490), Expect = 0.0
Identities = 490/490 (100%)
Strand = Plus / Plus
Query: 1096 caggctgcaaatgcaaaccctttgtatacctactttaagtcagggtggaaggagtttcag 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggctgcaaatgcaaaccctttgtatacctactttaagtcagggtggaaggagtttcag 60
Query: 1156 ccgatgacggcgaagactacttttgcttctgctattcagattggtgaccctgtttcaatt 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgatgacggcgaagactacttttgcttctgctattcagattggtgaccctgtttcaatt 120
Query: 1216 gacagggctgtgcttgcattgaagaattctaatgggattgttgaggaagctactgaggag 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacagggctgtgcttgcattgaagaattctaatgggattgttgaggaagctactgaggag 180
Query: 1276 gagttgatggatgctatggctcaagctgattccactggcatgtttgcttgtcctcatact 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagttgatggatgctatggctcaagctgattccactggcatgtttgcttgtcctcatact 240
Query: 1336 ggggttgctttggctgcattgtttaagctgaggaactctggggttatcaagcctactgat 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggggttgctttggctgcattgtttaagctgaggaactctggggttatcaagcctactgat 300
Query: 1396 aggactgttgtggtgagcactgctcatgggttgaagttcactcagtctaagattgattac 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggactgttgtggtgagcactgctcatgggttgaagttcactcagtctaagattgattac 360
Query: 1456 cattctgggcatattaaggacatggcttgccagtttgcgaatccgccgctgcaagtgaag 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cattctgggcatattaaggacatggcttgccagtttgcgaatccgccgctgcaagtgaag 420
Query: 1516 gctgactttgggtctgttatggatgttttgaagaagtatttgaagagcaaggctccaaag 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgactttgggtctgttatggatgttttgaagaagtatttgaagagcaaggctccaaag 480
Query: 1576 aatcattagg 1585
||||||||||
Sbjct: 481 aatcattagg 490
>gnl|LJGI|TC73038 similar to UniRef100_A7P5Z1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 543
Score = 468 bits (236), Expect = e-131
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 185 tccgcgacgaagctcgccgcaagaaaatctccaccggcgaccgccacctcttctccgcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tccgcgacgaagctcgccgcaagaaaatctccaccggcgaccgccacctcttctccgcca 367
Query: 245 aatacgtccccttcaacgccgacccatcctccaccgaatcctactccctcgacgaggtcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatacgtccccttcaacgccgacccatcctccaccgaatcctactccctcgacgaggtcg 427
Query: 305 tctaccgctcccaatccggcggcctcctcgacgtccagcacgacatcgccgccctcaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tctaccgctcccaatccggcggcctcctcgacgtccagcacgacatcgccgccctcaaag 487
Query: 365 ccttcgacggcgaacactggcgcaacctcttcgactcccgcgtcggtaaaaccacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ccttcgacggcgaacactggcgcaacctcttcgactcccgcgtcggtaaaaccacc 543
Score = 155 bits (78), Expect = 1e-36
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 1 atggcttcttcttcctcaaccctctttcaatcctcctcgnnnnnnnccggcggttttcca 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 124 atggcttcttcttcctcaaccctctttcaatcctcctcgtttttttccggcggttttcca 183
Query: 61 ctgccacctccccaacgcaaacgtaaaacccatttccac 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ctgccacctccccaacgcaaacgtaaaacccatttccac 222
>gnl|LJGI|TC72961 similar to UniRef100_Q2Q021 Cluster: Threonine synthase; n=1; Glycine
max|Rep: Threonine synthase - Glycine max (Soybean),
partial (63%)
Length = 1142
Score = 295 bits (149), Expect = 4e-79
Identities = 677/853 (79%)
Strand = Plus / Plus
Query: 581 gcggaatcagccacaccggaagcttcaaggatctgggcatgacggttctcgtcagccagg 640
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 3 gcggcatcagccacaccggaagcttcaaggatctcggcatgacggttctcgtcagccaag 62
Query: 641 ttaaccgcctgagaaaaatgaaccgccctgtaatcggcgttggatgcgcctccaccggcg 700
| |||||||| | | ||||||||| || | ||||||| || ||||||||||||||||
Sbjct: 63 taaaccgcctccgtagaatgaaccgtcccctcgtcggcgtcgggtgcgcctccaccggcg 122
Query: 701 acacctcggctgccctctcagcctactgcgcctccgctgggatcccctccattgtgtttc 760
|||| || || || ||||| |||||||||||| |||| || ||||| |||||||| || |
Sbjct: 123 acacatccgccgcgctctccgcctactgcgccgccgcgggaatcccatccattgtcttcc 182
Query: 761 tcccggcgaacagaatctccattgctcagctggttcagccaattgccaatggggcatttg 820
|||||| |||| ||||||| || |||||| |||| || || |||| || || | |
Sbjct: 183 tcccggacaacaagatctccaccgcgcagctgattcaacctgtttccaacggcgctctgg 242
Query: 821 ttctcagcatcgacaccgatttcgacggctgtatgcatctgattcgcgaggtgacggcag 880
|||||||||||| |||||| ||||||||||| ||| | | || || || | || || |
Sbjct: 243 ttctcagcatcgccaccgacttcgacggctgcatgaaattaatccgggaaatcaccgccg 302
Query: 881 agcttccgatttacctcgcgaattcgctgaatagtttgaggcttgaagggcagaaaactg 940
||||||| || ||||||||||| ||||| || || ||||| | || ||||||||||| |
Sbjct: 303 agcttccaatctacctcgcgaactcgctcaacagcttgagaatcgaggggcagaaaaccg 362
Query: 941 ctgcaattgagattttgcagcagtttgattggcaggttcctgattgggtgattatccctg 1000
| || ||||||||| | |||||||| | ||| ||||||||||||||||||| | || |
Sbjct: 363 ccgccattgagattcttcagcagttcaactgggaggttcctgattgggtgatcgttcccg 422
Query: 1001 gtgggaaccttgggaatatctatgctttttacaaagggtttcaaatgtgtaaagagcttg 1060
| |||||||| || || ||||| || || ||||| ||||| | ||||| || || || |
Sbjct: 423 gcgggaacctcggcaacatctacgccttctacaaggggttcaagatgtgcaaggatctcg 482
Query: 1061 ggcttgtggataaaattccaaggcttgtttgtgctcaggctgcaaatgcaaaccctttgt 1120
| || ||||| || ||||| | || |||||||||||||| || ||||| || ||| |||
Sbjct: 483 gcctcgtggagaagattcctcgactggtttgtgctcaggcggcgaatgcgaatcctctgt 542
Query: 1121 atacctactttaagtcagggtggaaggagtttcagccgatgacggcgaagactacttttg 1180
|| |||| || || |||||||||||||| || |||| | |||| | || || || |
Sbjct: 543 atcgatactacaaatctgggtggaaggagttcaaggcgattaaggcggaaaccacattcg 602
Query: 1181 cttctgctattcagattggtgaccctgtttcaattgacagggctgtgcttgcattgaaga 1240
|||| || ||||||||||||||||| ||||| ||||||||||| |||| ||| ||||||
Sbjct: 603 cttcggcgattcagattggtgacccggtttcgattgacagggcggtgcatgcgctgaaga 662
Query: 1241 attctaatgggattgttgaggaagctactgaggaggagttgatggatgctatggctcaag 1300
|| | ||||||||| ||||| || || ||||||||| |||||||||| ||||| |
Sbjct: 663 gttgtggtgggattgtggaggaggcgacggaggaggagctgatggatgcgatggcgttgg 722
Query: 1301 ctgattccactggcatgtttgcttgtcctcatactggggttgctttggctgcattgttta 1360
| ||||| ||||| |||||| ||| || ||||||||||| |||||| | ||| || |
Sbjct: 723 cggattcgactgggatgtttatttgcccgcatactggggtggctttgacggcactgacga 782
Query: 1361 agctgaggaactctggggttatcaagcctactgataggactgttgtggtgagcactgctc 1420
||||||| ||||| ||||| || | | ||||||| | || ||||||||||| || |
Sbjct: 783 agctgagaaactccggggtgattgcggcgggtgatagggcggtggtggtgagcaccgcgc 842
Query: 1421 atgggttgaagtt 1433
|||||||||||||
Sbjct: 843 atgggttgaagtt 855
>gnl|LJGI|TC71416 homologue to UniRef100_Q9MT28 Cluster: Threonine synthase,
chloroplast precursor; n=1; Solanum tuberosum|Rep:
Threonine synthase, chloroplast precursor - Solanum
tuberosum (Potato), partial (4%)
Length = 517
Score = 165 bits (83), Expect = 1e-39
Identities = 156/178 (87%), Gaps = 8/178 (4%)
Strand = Plus / Plus
Query: 1413 cactgctc-atgggttgaagttcactcagtctaagattgattaccattctgggcatatta 1471
|||||||| |||||||||||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 145 cactgctctatgggttgaagttcactcagtccaaaattgattaccattctaagaatatta 204
Query: 1472 aggacatggcttg-ccagtttgcgaatccgccgctgcaagtgaaggctgactttg----- 1525
||||||||||||| ||| ||| | || || || ||||||||||||||| ||||||
Sbjct: 205 aggacatggcttggccaatttcccaacccaccactgcaagtgaaggcttactttgtcttt 264
Query: 1526 -ggtctgttatggatgttttgaagaagtatttgaagagcaaggctccaaagaatcatt 1582
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 gggtctattatggatgttttgaagaagtatttgaagagcaagtctccaaagaatcatt 322
>gnl|LJGI|TC69973 homologue to UniRef100_Q2Q021 Cluster: Threonine synthase; n=1;
Glycine max|Rep: Threonine synthase - Glycine max
(Soybean), partial (23%)
Length = 537
Score = 145 bits (73), Expect = 1e-33
Identities = 142/165 (86%)
Strand = Plus / Plus
Query: 380 actggcgcaacctcttcgactcccgcgtcggtaaaaccacctggccctacggctccggcg 439
||||||| |||||||||||||| ||||| || || || || ||||| || || || || |
Sbjct: 355 actggcggaacctcttcgactcgcgcgtggggaagacgacgtggccgtatggttctggtg 414
Query: 440 tctggagcaagaaggagtgggtcctccctgagatcgacgacgacgacatcgtctccgcct 499
|||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 415 tctggagcaagaaggagtgggtcctcccggagattcaccccgacgacatcgtctccgcct 474
Query: 500 tcgaaggtaactccaacctcttctgggctgaacgattcggcaaac 544
|||| || |||||||||||||||||||| || |||| ||| ||||
Sbjct: 475 tcgagggaaactccaacctcttctgggcggagcgatacgggaaac 519