Miyakogusa Predicted Gene
- Lj3g3v0323290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0323290.1 tr|G7IUH0|G7IUH0_MEDTR Tir-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_2g099920 PE=4
SV,77.65,0,NB-ARC,NB-ARC; TIR,Toll/interleukin-1 receptor homology
(TIR) domain; no description,NULL; coiled-co,CUFF.40511.1
(3258 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68071 similar to UniRef100_Q2HVE0 Cluster: Leucine-ri... 1074 0.0
gnl|LJGI|TC67617 weakly similar to UniRef100_A7PPX7 Cluster: Chr... 58 4e-07
gnl|LJGI|FS333816 weakly similar to UniRef100_A2Q1X9 Cluster: TI... 56 1e-06
gnl|LJGI|GO033924 weakly similar to UniRef100_Q2HS00 Cluster: TI... 56 1e-06
gnl|LJGI|DC595246 weakly similar to UniRef100_A7QHI1 Cluster: Ch... 54 6e-06
gnl|LJGI|DC593443 similar to UniRef100_Q9M5V7 Cluster: Disease r... 54 6e-06
>gnl|LJGI|TC68071 similar to UniRef100_Q2HVE0 Cluster: Leucine-rich repeat;
Leucine-rich; n=1; Medicago truncatula|Rep: Leucine-rich
repeat; Leucine-rich - Medicago truncatula (Barrel
medic), partial (12%)
Length = 1024
Score = 1074 bits (542), Expect = 0.0
Identities = 556/563 (98%)
Strand = Plus / Plus
Query: 2696 atctgtgttctgctccgcgttccaaatttatgggtttcatattctgcgtcattgtcggta 2755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atctgtgttctgctccgcgttccaaatttatgggtttcatattctgcgtcattgtcggta 60
Query: 2756 agttcccatcagatgacaacaacttcatagggtgtgactgttacctggaaaccggtaaca 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttcccatcagatgacaacaacttcatagggtgtgactgttacctggaaaccggtaaca 120
Query: 2816 gcgaaagggtcaaaatggatgcatggactagtatccacgccggtaaatttgtttctgatc 2875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgaaagggtcaaaatggatgcatggactagtatccacgccggtaaatttgtttctgatc 180
Query: 2876 atgtctgtatgtggtatgatcaacgatgctgtctgcaaagcagtgaatgtgaaaatgata 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtctgtatgtggtatgatcaacgatgctgtctgcaaagcagtgaatgtgaaaatgata 240
Query: 2936 gtatggaaatggaagaacatgtggctggttgcaatattccaaaggtttcatttgaattct 2995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtatggaaatggaagaacatgtggctggttgcaatattccaaaggtttcatttgaattct 300
Query: 2996 ttgctcaaagtggaagcacttggaaaaagcatgatgatatcattgtaaaagggtgtggag 3055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgctcaaagtggaagcacttggaaaaagcatgatgatatcattgtaaaagggtgtggag 360
Query: 3056 tgtgtcctttatacgacacagaatatgacaatttcataaagcaaatggaattggagttgg 3115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtgtcctttatacgacacagaatatgacaatttcataaagcaaatggaattggagttgg 420
Query: 3116 aaaccactttgcagtctatagcaaaaatttcagttgcatgctctgttaagaaagaaacac 3175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaccactttgcagtctatagcaaaaatttcagttgcatgctctgttaagaaagaaacac 480
Query: 3176 aatgtaagaaattctttnnnnnnnttcagattgggacatggaagagtgcaacacagggat 3235
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatgtaagaaattctttcccccccttcagattgggacatggaagagtgcaacacagggat 540
Query: 3236 tgaaagacatattgttcttctga 3258
|||||||||||||||||||||||
Sbjct: 541 tgaaagacatattgttcttctga 563
Score = 178 bits (90), Expect = 1e-43
Identities = 251/304 (82%), Gaps = 18/304 (5%)
Strand = Plus / Plus
Query: 1690 catttaaagaaaattgacctgagttattccaagtatctgatagagctcccagatttttca 1749
||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||| ||
Sbjct: 595 catttaaagaaaattgacctgagctatttcaagtatctgtt-gagctcccagatttt-ca 652
Query: 1750 aaggcctcaaatcttgaagaagtagaactctacgcttgcagaaatttgctgagtgttcat 1809
||||||||| | ||||||||| |||||||||| |||||||||||| |||||||||||||
Sbjct: 653 aaggcctcagaacttgaagaaatagaactctatgcttgcagaaatgcgctgagtgttcat 712
Query: 1810 ccctctatcttatctcttaacaagcttgtgcggttgaaccttttttactgcaaagcgctt 1869
| || |||| ||||| || |||||||| | ||||||||||||| ||
Sbjct: 713 ctgcctttcttgtctct-------------cgattgaacctgtattactgcaaagcgatt 759
Query: 1870 accagtcttcgaagcgaaacccatttaagatccctccgtgacctcttcctcggtggctgc 1929
||||||||||||||||||||||| ||||||||||||||||||| ||| || ||||| | |
Sbjct: 760 accagtcttcgaagcgaaacccacttaagatccctccgtgaccactttcttggtgggtac 819
Query: 1930 tc---aaaactccaagagttttcagtgacttcagagagcatgaaagacttgactttaact 1986
|| || ||| | ||||||||| |||||||||| || |||||||||| || || |||
Sbjct: 820 tcattaagacttctggagttttcaatgacttcagaaagtgtgaaagacttaaccttgact 879
Query: 1987 tcaa 1990
||||
Sbjct: 880 tcaa 883
>gnl|LJGI|TC67617 weakly similar to UniRef100_A7PPX7 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 633
Score = 58.0 bits (29), Expect = 4e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 434 ttggaatttggggcatggggggaattggtaagacaactattgcag 478
||||||||||||| |||||||| ||||| |||||||| |||||||
Sbjct: 393 ttggaatttggggtatggggggcattggcaagacaaccattgcag 437
>gnl|LJGI|FS333816 weakly similar to UniRef100_A2Q1X9 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel medic),
partial (13%)
Length = 582
Score = 56.0 bits (28), Expect = 1e-06
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1261 atgcatgacttgatacaagaaatgggttgggagattgttc 1300
|||||||||||| ||||||||||||| ||||| |||||||
Sbjct: 195 atgcatgacttgttacaagaaatgggatgggaaattgttc 234
>gnl|LJGI|GO033924 weakly similar to UniRef100_Q2HS00 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel
medic), partial (10%)
Length = 561
Score = 56.0 bits (28), Expect = 1e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 26 actatgcttcttctaaatggtgcttggaggagcttgtgaaaata 69
||||||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 291 actatgcagcttctgaatggtgcttggatgagcttgtgaaaata 334
>gnl|LJGI|DC595246 weakly similar to UniRef100_A7QHI1 Cluster: Chromosome chr5
scaffold_98, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_98, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 434
Score = 54.0 bits (27), Expect = 6e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 11 tcatattctccaaggactatgcttcttctaaatggtgcttggaggagcttgtgaa 65
|||| |||||||| |||||||||||||| || ||||| ||||| || ||||||||
Sbjct: 323 tcattttctccaaagactatgcttcttccaagtggtgtttggatgaacttgtgaa 377
>gnl|LJGI|DC593443 similar to UniRef100_Q9M5V7 Cluster: Disease resistance-like
protein; n=1; Glycine max|Rep: Disease resistance-like
protein - Glycine max (Soybean), partial (54%)
Length = 564
Score = 54.0 bits (27), Expect = 6e-06
Identities = 96/119 (80%)
Strand = Plus / Plus
Query: 673 aaggttcttcttgttcttgatgatatcagtgattcagagcacctagaaattttagttgga 732
||||||||| |||||||||||||| | | |||| |||| || |||||| | || |||||
Sbjct: 219 aaggttcttattgttcttgatgatgtgaatgatacagatcaggtagaaaatatatttgga 278
Query: 733 gcacttgattggtttggatctggtagcagaattattgtaacaactagagataagcaagt 791
| |||||||| || || ||||| ||||| || ||||||||||||||||||||||
Sbjct: 279 acggttgattggcttcactcaggtagtagaataataataacaactagagataagcaagt 337