Miyakogusa Predicted Gene

Lj3g3v0312100.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0312100.1 Non Chatacterized Hit- tr|I1MQQ2|I1MQQ2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,80.25,0,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide
repea,CUFF.40492.1
         (2180 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593611 similar to UniRef100_A3I9W7 Cluster: Thioredox...   862   0.0  

>gnl|LJGI|DC593611 similar to UniRef100_A3I9W7 Cluster: Thioredoxin; n=1; Bacillus sp.
           B14905|Rep: Thioredoxin - Bacillus sp. B14905, partial
           (6%)
          Length = 588

 Score =  862 bits (435), Expect = 0.0
 Identities = 435/435 (100%)
 Strand = Plus / Plus

                                                                       
Query: 132 agatttcttcatcacccttcttcaacaatgctccactctccaacaagctcgccaactcca 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 agatttcttcatcacccttcttcaacaatgctccactctccaacaagctcgccaactcca 213

                                                                       
Query: 192 ctcccaaaccatcctcaccgccgcgtatcgcaaacccttcttagcagccaagctcatagc 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ctcccaaaccatcctcaccgccgcgtatcgcaaacccttcttagcagccaagctcatagc 273

                                                                       
Query: 252 tctctatgcgcgctttgggtctgtctctcatgctcagaaagtcttcaatgctgtcccatt 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tctctatgcgcgctttgggtctgtctctcatgctcagaaagtcttcaatgctgtcccatt 333

                                                                       
Query: 312 tgagcgtcttgatcacattcctctgtggaattcgattatcagagctaatgtctctcatgg 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgagcgtcttgatcacattcctctgtggaattcgattatcagagctaatgtctctcatgg 393

                                                                       
Query: 372 gtacttcgaatttgctattgaaatttatgttggaatgcgaaaatttggatttttccctga 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtacttcgaatttgctattgaaatttatgttggaatgcgaaaatttggatttttccctga 453

                                                                       
Query: 432 tgggttcactctcccgttgataattgaggcttgttcgcatctgggtagctctagtctctg 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgggttcactctcccgttgataattgaggcttgttcgcatctgggtagctctagtctctg 513

                                                                       
Query: 492 caggattgttcattgtcatgctttggaactgggttttcggaatcatctccatgtggtgaa 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 caggattgttcattgtcatgctttggaactgggttttcggaatcatctccatgtggtgaa 573

                          
Query: 552 taaattggtggggat 566
           |||||||||||||||
Sbjct: 574 taaattggtggggat 588



 Score =  168 bits (85), Expect = 9e-41
 Identities = 85/85 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctcaatgcagcccctgtgcgcttcctctgttcttcctctctacgtttccgaccccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23  atgctcaatgcagcccctgtgcgcttcctctgttcttcctctctacgtttccgaccccat 82

                                    
Query: 61  tttctcactcgttcattctccctct 85
           |||||||||||||||||||||||||
Sbjct: 83  tttctcactcgttcattctccctct 107