Miyakogusa Predicted Gene
- Lj3g3v0307990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0307990.1 Non Chatacterized Hit- tr|A2Q447|A2Q447_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,44.76,0.000000004,seg,NULL,BW616849.path2.1
(454 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW616849 homologue to UniRef100_A6M8U7 Cluster: CA-resp... 305 1e-82
gnl|LJGI|TC75072 similar to UniRef100_A7P6Q7 Cluster: Chromosome... 297 3e-80
>gnl|LJGI|BW616849 homologue to UniRef100_A6M8U7 Cluster: CA-responsive protein; n=1;
Brassica oleracea|Rep: CA-responsive protein - Brassica
oleracea (Wild cabbage), partial (7%)
Length = 478
Score = 305 bits (154), Expect = 1e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 143 acaaacgcttctcaaaacacccaactgaagaaaacaaacaaaaccgccacaaagatggtt 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 acaaacgcttctcaaaacacccaactgaagaaaacaaacaaaaccgccacaaagatggtt 226
Query: 203 taacccgacccgaaaattccgacccggtccgatcggttctgatgggtggtgctctgccct 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 taacccgacccgaaaattccgacccggtccgatcggttctgatgggtggtgctctgccct 286
Query: 263 ctgattccgatgacccggattcgagtccgcgagg 296
||||||||||||||||||||||||||||||||||
Sbjct: 287 ctgattccgatgacccggattcgagtccgcgagg 320
Score = 178 bits (90), Expect = 2e-44
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 365 cggatccgggttcggattcgggtgttcggtttgaaaccgcttgcttgtacccgtttacgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cggatccgggttcggattcgggtgttcggtttgaaaccgcttgcttgtacccgtttacgt 448
Query: 425 cttctagtagcgctatgcagaggaagatca 454
||||||||||||||||||||||||||||||
Sbjct: 449 cttctagtagcgctatgcagaggaagatca 478
Score = 87.7 bits (44), Expect = 5e-17
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 42 ttcttctcattctaacttcttcactcctcaaatgcacgacccca 85
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttcttctcattctaacttcttcactcctcaaatgcacgacccca 109
>gnl|LJGI|TC75072 similar to UniRef100_A7P6Q7 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 805
Score = 297 bits (150), Expect = 3e-80
Identities = 153/154 (99%)
Strand = Plus / Plus
Query: 143 acaaacgcttctcaaaacacccaactgaagaaaacaaacaaaaccgccacaaagatggtt 202
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 207 acaaacgcttctcaaaacacccaacagaagaaaacaaacaaaaccgccacaaagatggtt 266
Query: 203 taacccgacccgaaaattccgacccggtccgatcggttctgatgggtggtgctctgccct 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 taacccgacccgaaaattccgacccggtccgatcggttctgatgggtggtgctctgccct 326
Query: 263 ctgattccgatgacccggattcgagtccgcgagg 296
||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgattccgatgacccggattcgagtccgcgagg 360
Score = 182 bits (92), Expect = 1e-45
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 363 ttcggatccgggttcggattcgggtgttcggtttgaaaccgcttgcttgtacccgtttac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttcggatccgggttcggattcgggtgttcggtttgaaaccgcttgcttgtacccgtttac 486
Query: 423 gtcttctagtagcgctatgcagaggaagatca 454
||||||||||||||||||||||||||||||||
Sbjct: 487 gtcttctagtagcgctatgcagaggaagatca 518
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 42 ttcttctcattctaacttcttcactcctcaaatgcacgacccc 84
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ttcttctcattctaacttcttcactcctcaaatgcacgacccc 147