Miyakogusa Predicted Gene
- Lj3g3v0290390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0290390.1 Non Chatacterized Hit- tr|I3SH56|I3SH56_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.51,0,seg,NULL;
Snf7,Snf7; coiled-coil,NULL; CHARGED MULTIVESICULAR BODY PROTEIN
1A,NULL; CHARGED MULTIVES,CUFF.40453.1
(616 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71905 1221 0.0
gnl|LJGI|TC66350 1221 0.0
gnl|LJGI|FS341642 745 0.0
>gnl|LJGI|TC71905
Length = 793
Score = 1221 bits (616), Expect = 0.0
Identities = 616/616 (100%)
Strand = Plus / Plus
Query: 1 atgggaggaagcgcagagaaactgatgaaccagatcatggaactcaaattcacctcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgggaggaagcgcagagaaactgatgaaccagatcatggaactcaaattcacctcaaaa 162
Query: 61 tctcttcaacgccaagctcgaaaatgcgagaaggaagagaaatcggagaagctcaaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tctcttcaacgccaagctcgaaaatgcgagaaggaagagaaatcggagaagctcaaggtc 222
Query: 121 aagaaagcaatcgaaaagggcaacatggacggcgcacgaatctacgccgagaacgccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aagaaagcaatcgaaaagggcaacatggacggcgcacgaatctacgccgagaacgccatc 282
Query: 181 cgcaaacgcaccgagcagatgaactacctccgcctctcctcccgcctcgacgccgtcgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cgcaaacgcaccgagcagatgaactacctccgcctctcctcccgcctcgacgccgtcgtc 342
Query: 241 gcccgtctcgacacccaggccaagatgaacaccatcagcaagtccatggggaacatcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gcccgtctcgacacccaggccaagatgaacaccatcagcaagtccatggggaacatcgtc 402
Query: 301 aagtcgcttgagtctactcttgctactgggaatcttcagaagatgtctgagactatggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aagtcgcttgagtctactcttgctactgggaatcttcagaagatgtctgagactatggat 462
Query: 361 agctttgagaagcagtttgttaatatggaggttcaggctgaattcatggagagttccatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agctttgagaagcagtttgttaatatggaggttcaggctgaattcatggagagttccatg 522
Query: 421 gcgggatcgacttcgctgtctactcctgaaggtgatgttaacaaccttatgcagcaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gcgggatcgacttcgctgtctactcctgaaggtgatgttaacaaccttatgcagcaggtg 582
Query: 481 gctgatgattatggcctcgaggtctcggttgggctgcctcaggctgctgcccacgcggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gctgatgattatggcctcgaggtctcggttgggctgcctcaggctgctgcccacgcggtt 642
Query: 541 ccggttaaggaagctgaaaaggttgatgaggatgatctttccaggcgcctcgcggagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ccggttaaggaagctgaaaaggttgatgaggatgatctttccaggcgcctcgcggagctt 702
Query: 601 aaggccagaggttaat 616
||||||||||||||||
Sbjct: 703 aaggccagaggttaat 718
>gnl|LJGI|TC66350
Length = 1040
Score = 1221 bits (616), Expect = 0.0
Identities = 616/616 (100%)
Strand = Plus / Plus
Query: 1 atgggaggaagcgcagagaaactgatgaaccagatcatggaactcaaattcacctcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgggaggaagcgcagagaaactgatgaaccagatcatggaactcaaattcacctcaaaa 132
Query: 61 tctcttcaacgccaagctcgaaaatgcgagaaggaagagaaatcggagaagctcaaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tctcttcaacgccaagctcgaaaatgcgagaaggaagagaaatcggagaagctcaaggtc 192
Query: 121 aagaaagcaatcgaaaagggcaacatggacggcgcacgaatctacgccgagaacgccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aagaaagcaatcgaaaagggcaacatggacggcgcacgaatctacgccgagaacgccatc 252
Query: 181 cgcaaacgcaccgagcagatgaactacctccgcctctcctcccgcctcgacgccgtcgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgcaaacgcaccgagcagatgaactacctccgcctctcctcccgcctcgacgccgtcgtc 312
Query: 241 gcccgtctcgacacccaggccaagatgaacaccatcagcaagtccatggggaacatcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gcccgtctcgacacccaggccaagatgaacaccatcagcaagtccatggggaacatcgtc 372
Query: 301 aagtcgcttgagtctactcttgctactgggaatcttcagaagatgtctgagactatggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aagtcgcttgagtctactcttgctactgggaatcttcagaagatgtctgagactatggat 432
Query: 361 agctttgagaagcagtttgttaatatggaggttcaggctgaattcatggagagttccatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agctttgagaagcagtttgttaatatggaggttcaggctgaattcatggagagttccatg 492
Query: 421 gcgggatcgacttcgctgtctactcctgaaggtgatgttaacaaccttatgcagcaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gcgggatcgacttcgctgtctactcctgaaggtgatgttaacaaccttatgcagcaggtg 552
Query: 481 gctgatgattatggcctcgaggtctcggttgggctgcctcaggctgctgcccacgcggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gctgatgattatggcctcgaggtctcggttgggctgcctcaggctgctgcccacgcggtt 612
Query: 541 ccggttaaggaagctgaaaaggttgatgaggatgatctttccaggcgcctcgcggagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ccggttaaggaagctgaaaaggttgatgaggatgatctttccaggcgcctcgcggagctt 672
Query: 601 aaggccagaggttaat 616
||||||||||||||||
Sbjct: 673 aaggccagaggttaat 688
>gnl|LJGI|FS341642
Length = 830
Score = 745 bits (376), Expect = 0.0
Identities = 556/616 (90%)
Strand = Plus / Plus
Query: 1 atgggaggaagcgcagagaaactgatgaaccagatcatggaactcaaattcacctcaaaa 60
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 100 atgggaggaagcacagagaagctgatgaaccagatcatggaactcaaattcacctccaaa 159
Query: 61 tctcttcaacgccaagctcgaaaatgcgagaaggaagagaaatcggagaagctcaaggtc 120
|| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 160 tcacttcaacgccaagctcgaaaatgcgagaaggaggagaaatccgagaagctcaaggtc 219
Query: 121 aagaaagcaatcgaaaagggcaacatggacggcgcacgaatctacgccgagaacgccatc 180
|||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 220 aagaaagccatcgagaaaggcaacatggacggcgcacgcatctacgccgagaacgccatc 279
Query: 181 cgcaaacgcaccgagcagatgaactacctccgcctctcctcccgcctcgacgccgtcgtc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 280 cgcaaacgcaccgagcagatgaactacctccgcctctcttcccgcctcgacgccgtcgtc 339
Query: 241 gcccgtctcgacacccaggccaagatgaacaccatcagcaagtccatggggaacatcgtc 300
||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 340 gcccgcctcgacacccaggccaagatgaccaccatcagcaagtccatggggaacattgtc 399
Query: 301 aagtcgcttgagtctactcttgctactgggaatcttcagaagatgtctgagactatggat 360
||||| |||||||| | || |||||||| || || ||||||||||| ||||| ||||||
Sbjct: 400 aagtctcttgagtcctccctcgctactggcaacctccagaagatgtcggagaccatggat 459
Query: 361 agctttgagaagcagtttgttaatatggaggttcaggctgaattcatggagagttccatg 420
||||||||||||||||||||||| ||||||||||||||||| ||||||||| | | |||
Sbjct: 460 agctttgagaagcagtttgttaacatggaggttcaggctgagttcatggagtctgctatg 519
Query: 421 gcgggatcgacttcgctgtctactcctgaaggtgatgttaacaaccttatgcagcaggtg 480
|| || || || || || || || ||||| || || ||||||| ||||||||||||||
Sbjct: 520 gctggttccacctctctttcaacgcctgagggggaggttaacagtcttatgcagcaggtc 579
Query: 481 gctgatgattatggcctcgaggtctcggttgggctgcctcaggctgctgcccacgcggtt 540
|| |||||||| ||||||||||| ||||| || || |||||| | ||||| |||||||||
Sbjct: 580 gcggatgattacggcctcgaggtatcggtcggtctccctcagcccgctgcacacgcggtt 639
Query: 541 ccggttaaggaagctgaaaaggttgatgaggatgatctttccaggcgcctcgcggagctt 600
|||| |||||||||||| ||||||||||||||||||||| |||| || |||||||||||
Sbjct: 640 ccggctaaggaagctgacaaggttgatgaggatgatcttaccagacggctcgcggagctc 699
Query: 601 aaggccagaggttaat 616
||||| ||||||||||
Sbjct: 700 aaggctagaggttaat 715