Miyakogusa Predicted Gene
- Lj3g3v0290030.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0290030.2 Non Chatacterized Hit- tr|I3S9J1|I3S9J1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,96.59,9.99967e-42,seg,NULL,CUFF.40452.2
(309 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68359 similar to UniRef100_Q0D4Y2 Cluster: Os07g05973... 513 e-145
gnl|LJGI|TC64446 similar to UniRef100_A6WBM5 Cluster: Transcript... 432 e-121
gnl|LJGI|GO012595 similar to UniRef100_A7R0Z8 Cluster: Chromosom... 254 3e-67
gnl|LJGI|GO026344 similar to UniRef100_A8J3Q7 Cluster: Predicted... 101 2e-21
gnl|LJGI|AV780610 similar to UniRef100_Q6NYT9 Cluster: Orthodent... 100 1e-20
gnl|LJGI|FS328260 similar to UniRef100_Q1H445 Cluster: Transcrip... 94 6e-19
gnl|LJGI|BP082387 similar to UniRef100_Q6L6F2 Cluster: Polyprote... 76 1e-13
gnl|LJGI|FS334361 homologue to UniRef100_A7R6S9 Cluster: Chromos... 72 2e-12
gnl|LJGI|FS333706 weakly similar to UniRef100_A7PP87 Cluster: Ch... 72 2e-12
gnl|LJGI|TC69937 similar to UniRef100_Q3HY29 Cluster: Cyclooxyge... 68 3e-11
gnl|LJGI|GO010191 similar to UniRef100_A7R0Z8 Cluster: Chromosom... 54 5e-07
gnl|LJGI|TC67395 similar to UniRef100_A7R0Z8 Cluster: Chromosome... 54 5e-07
gnl|LJGI|TC58820 similar to UniRef100_A7R0Z8 Cluster: Chromosome... 54 5e-07
>gnl|LJGI|TC68359 similar to UniRef100_Q0D4Y2 Cluster: Os07g0597300 protein; n=2;
Oryza sativa Japonica Group|Rep: Os07g0597300 protein -
Oryza sativa subsp. japonica (Rice), partial (9%)
Length = 1114
Score = 513 bits (259), Expect = e-145
Identities = 270/273 (98%), Gaps = 3/273 (1%)
Strand = Plus / Plus
Query: 37 attgaacacgaacacgatggtgtctctgcggttcgaggcggtgaacacgatggagattgg 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 attgaacacgaacacgatggtgtctctgcggttcgaggcggtgaacacgatggagattgg 281
Query: 97 ggagctctgatcttcaatcagtttcaccaccatatctctccatctgcgagcgactacaag 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggagctctgatcttcaatcagtttcaccaccatatctctccatctgcgagcgactacaag 341
Query: 157 ttccagcgcaaagttgttcatcagaagggaatttgctttagcaatactgagaggcttggc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttccagcgcaaagttgttcatcagaagggaatttgctttagcaatactgagaggcttggc 401
Query: 217 ttggagggtttacctgttgtcatctctttttggtcttctcccacagaaggtggaagattg 276
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 402 ttggagggtttacctgttgtcatctctttttggtcttctcccac---aggtggaagattg 458
Query: 277 aaagagaaggaaaggggacagagtgtttgttga 309
|||||||||||||||||||||||||||||||||
Sbjct: 459 aaagagaaggaaaggggacagagtgtttgttga 491
>gnl|LJGI|TC64446 similar to UniRef100_A6WBM5 Cluster: Transcriptional regulator,
TetR family; n=1; Kineococcus radiotolerans
SRS30216|Rep: Transcriptional regulator, TetR family -
Kineococcus radiotolerans SRS30216, partial (6%)
Length = 1103
Score = 432 bits (218), Expect = e-121
Identities = 224/226 (99%)
Strand = Plus / Plus
Query: 37 attgaacacgaacacgatggtgtctctgcggttcgaggcggtgaacacgatggagattgg 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 attgaacacgaacacgatggtgtctctgcggttcgaggcggtgaacacgatggagattgg 226
Query: 97 ggagctctgatcttcaatcagtttcaccaccatatctctccatctgcgagcgactacaag 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ggagctctgatcttcaatcagtttcaccaccatatctctccatctgcgagcgactacaag 286
Query: 157 ttccagcgcaaagttgttcatcagaagggaatttgctttagcaatactgagaggcttggc 216
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttccagcgcagagttgttcatcagaagggaatttgctttagcaatactgagaggcttggc 346
Query: 217 ttggagggtttacctgttgtcatctctttttggtcttctcccacag 262
|||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 347 ttggagggtttacctgttgtcatctctttttggtcttctcgcacag 392
Score = 85.7 bits (43), Expect = 1e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 263 aaggtggaagattgaaagagaaggaaaggggacagagtgtttgttga 309
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 516 aaggtggaagattgaaagagaaggaaagggaacagagtgtttgttga 562
>gnl|LJGI|GO012595 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 472
Score = 254 bits (128), Expect = 3e-67
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 182 agggaatttgctttagcaatactgagaggcttggcttggagggtttacctgttgtcatct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 agggaatttgctttagcaatactgagaggcttggcttggagggtttacctgttgtcatct 200
Query: 242 ctttttggtcttctcccacagaaggtggaagattgaaagagaaggaaaggggacagagtg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttttggtcttctcccacagaaggtggaagattgaaagagaaggaaaggggacagagtg 260
Query: 302 tttgttga 309
||||||||
Sbjct: 261 tttgttga 268
>gnl|LJGI|GO026344 similar to UniRef100_A8J3Q7 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas, partial (0%)
Length = 641
Score = 101 bits (51), Expect = 2e-21
Identities = 91/103 (88%), Gaps = 6/103 (5%)
Strand = Plus / Plus
Query: 46 gaacacgatggtgtctctgcggttcgaggcggtgaacacgatggagattggggagctctg 105
|||| ||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||
Sbjct: 183 gaactcgatggtgtctctgcagttcgggacggtgaacacg---gaggctggggagctctg 239
Query: 106 atcttcaatc---agtttcaccaccatatctctccatctgcga 145
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 240 atcttcaatcgttagtttcaccaccatatctctccatctgcga 282
>gnl|LJGI|AV780610 similar to UniRef100_Q6NYT9 Cluster: Orthodenticle homolog 5; n=1;
Danio rerio|Rep: Orthodenticle homolog 5 - Danio rerio
(Zebrafish) (Brachydanio rerio), partial (5%)
Length = 520
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/100 (88%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 46 gaacacgatggtgtctctgcggttcgaggcggtgaacacgatggagattggggagctctg 105
|||| |||||||||||||||||||| ||||||||||||| ||| || |||||||||
Sbjct: 147 gaactcgatggtgtctctgcggttccgggcggtgaacacg---gaggctgtggagctctg 203
Query: 106 atcttcaatcagtttcaccaccatatctctccatctgcga 145
|||||||||| |||| ||||| ||||||||||||||||||
Sbjct: 204 atcttcaatccgtttaaccactatatctctccatctgcga 243
>gnl|LJGI|FS328260 similar to UniRef100_Q1H445 Cluster: Transcriptional regulator,
TetR family; n=1; Methylobacillus flagellatus KT|Rep:
Transcriptional regulator, TetR family - Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875), partial
(7%)
Length = 501
Score = 93.7 bits (47), Expect = 6e-19
Identities = 82/93 (88%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 155 agttccagcgcaaagttgttcatcagaagggaatttgctttagca---atactgagaggc 211
||||||| ||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct: 360 agttccaacgcaaagttgttcatcagaagggaatttgctttagcatatatccaaagaggc 419
Query: 212 ttggcttggagggtttacctgttgtcatctctt 244
||||||| || ||| || |||||||||||||||
Sbjct: 420 ttggcttagaaggtgtatctgttgtcatctctt 452
>gnl|LJGI|BP082387 similar to UniRef100_Q6L6F2 Cluster: Polyprotein; n=1; Turnip
mosaic virus|Rep: Polyprotein - Turnip mosaic virus,
partial (3%)
Length = 475
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 264 aggtggaagattgaaagagaaggaaaggggacagagtgtttgttga 309
||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 423 aggtggaagattgaaagagaaggaaagggaatagagtgtttgttga 378
>gnl|LJGI|FS334361 homologue to UniRef100_A7R6S9 Cluster: Chromosome undetermined
scaffold_1408, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1408,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 684
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/69 (88%), Gaps = 4/69 (5%)
Strand = Plus / Plus
Query: 116 agtttcaccaccatatctctccatctgcgagcgactacaagttccagcgcaaagttgttc 175
|||||||||||||| ||| ||||||||||| ||||||| || |||||||||||||||
Sbjct: 154 agtttcaccaccatttctttccatctgcga----ctacaagatcaagcgcaaagttgttc 209
Query: 176 atcagaagg 184
|||||||||
Sbjct: 210 atcagaagg 218
>gnl|LJGI|FS333706 weakly similar to UniRef100_A7PP87 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 720
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/69 (88%), Gaps = 4/69 (5%)
Strand = Plus / Plus
Query: 116 agtttcaccaccatatctctccatctgcgagcgactacaagttccagcgcaaagttgttc 175
|||||||||||||| ||| ||||||||||| ||||||| || |||||||||||||||
Sbjct: 213 agtttcaccaccatttctttccatctgcga----ctacaagatcaagcgcaaagttgttc 268
Query: 176 atcagaagg 184
|||||||||
Sbjct: 269 atcagaagg 277
>gnl|LJGI|TC69937 similar to UniRef100_Q3HY29 Cluster: Cyclooxygenase 1b2; n=1; Homo
sapiens|Rep: Cyclooxygenase 1b2 - Homo sapiens (Human),
partial (3%)
Length = 1257
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 261 agaaggtggaagattgaaagagaaggaaaggggacagagtgtttgt 306
|||||||||||||||||||||||||||||| | | |||||||||||
Sbjct: 657 agaaggtggaagattgaaagagaaggaaagagaatagagtgtttgt 702
>gnl|LJGI|GO010191 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 619
Score = 54.0 bits (27), Expect = 5e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 182 agggaatttgctttagcaatactgagaggcttggcttggagggtttacctgttgtcatct 241
|||||||| |||| |||| ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 155 agggaattggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatct 214
Query: 242 ctt 244
|||
Sbjct: 215 ctt 217
>gnl|LJGI|TC67395 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 964
Score = 54.0 bits (27), Expect = 5e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 182 agggaatttgctttagcaatactgagaggcttggcttggagggtttacctgttgtcatct 241
|||||||| |||| |||| ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 41 agggaattggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatct 100
Query: 242 ctt 244
|||
Sbjct: 101 ctt 103
>gnl|LJGI|TC58820 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (87%)
Length = 830
Score = 54.0 bits (27), Expect = 5e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 182 agggaatttgctttagcaatactgagaggcttggcttggagggtttacctgttgtcatct 241
|||||||| |||| |||| ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 180 agggaattggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatct 239
Query: 242 ctt 244
|||
Sbjct: 240 ctt 242