Miyakogusa Predicted Gene

Lj3g3v0273590.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0273590.1 tr|G7IUM5|G7IUM5_MEDTR
Dihydroflavonol-4-reductase OS=Medicago truncatula GN=MTR_2g101330
PE=4 SV=1,85.87,0,NAD(P)-binding Rossmann-fold domains,NULL; no
description,NAD(P)-binding domain;
Epimerase,NAD-depen,gene.g44991.t1.1
         (876 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70508 similar to UniRef100_A7P8U7 Cluster: Chromosome...   904   0.0  
gnl|LJGI|TC68384 homologue to UniRef100_Q93YG3 Cluster: Chloroph...   238   5e-62

>gnl|LJGI|TC70508 similar to UniRef100_A7P8U7 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (47%)
          Length = 721

 Score =  904 bits (456), Expect = 0.0
 Identities = 456/456 (100%)
 Strand = Plus / Plus

                                                                       
Query: 421 tgggaatactgcaaagagaatggaatacatttagtgactgttcttccatcattcatcatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgggaatactgcaaagagaatggaatacatttagtgactgttcttccatcattcatcatt 60

                                                                       
Query: 481 ggaccaagcttgccaccagatttgtgttctactgcatctgatgttctaggccttctcaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggaccaagcttgccaccagatttgtgttctactgcatctgatgttctaggccttctcaaa 120

                                                                       
Query: 541 ggggaaacagagaaatttcaatggcatggaagaatgggttatgttcatattgatgatgtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggggaaacagagaaatttcaatggcatggaagaatgggttatgttcatattgatgatgtt 180

                                                                       
Query: 601 gccctttgtcacattcttctttttgaaaatgaagcctcccatggcagatacctttgtagc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccctttgtcacattcttctttttgaaaatgaagcctcccatggcagatacctttgtagc 240

                                                                       
Query: 661 tctacagtcatggataatgacgatttggttgccttgttagcaacacgttatcctagcttg 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctacagtcatggataatgacgatttggttgccttgttagcaacacgttatcctagcttg 300

                                                                       
Query: 721 cctatcccaaaaaggttccagaaactagataggccacattatgatctaaacatcggaaaa 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctatcccaaaaaggttccagaaactagataggccacattatgatctaaacatcggaaaa 360

                                                                       
Query: 781 ctgagcagcctgggattcaagtttaagtctgttgaagaaatgtttgatgattgcattgca 840
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgagcagcctgggattcaagtttaagtctgttgaagaaatgtttgatgattgcattgca 420

                                               
Query: 841 tcgcttgtggagcaaggccatctcaaattcaaatga 876
           ||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgcttgtggagcaaggccatctcaaattcaaatga 456


>gnl|LJGI|TC68384 homologue to UniRef100_Q93YG3 Cluster: Chlorophyll a/b binding
           protein type II precursor; n=2; eurosids I|Rep:
           Chlorophyll a/b binding protein type II precursor -
           Glycine max (Soybean), complete
          Length = 1345

 Score =  238 bits (120), Expect = 5e-62
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                       
Query: 757 cattatgatctaaacatcggaaaactgagcagcctgggattcaagtttaagtctgttgaa 816
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cattatgatctaaacatcggaaaactgagcagcctgggattcaagtttaagtctgttgaa 60

                                                                       
Query: 817 gaaatgtttgatgattgcattgcatcgcttgtggagcaaggccatctcaaattcaaatga 876
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaaatgtttgatgattgcattgcatcgcttgtggagcaaggccatctcaaattcaaatga 120


  Database: LJGI
    Posted date:  Nov 10, 2011  4:10 PM
  Number of letters in database: 32,788,469
  Number of sequences in database:  47,486
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 47486
Number of Hits to DB: 315,190,054
Number of extensions: 36644371
Number of successful extensions: 36644371
Number of sequences better than 1.0e-05: 10077
Number of HSP's gapped: 36637667
Number of HSP's successfully gapped: 20127
Length of database: 32,788,469
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 25 (50.1 bits)