Miyakogusa Predicted Gene

Lj3g3v0270520.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0270520.2 tr|F2DD79|F2DD79_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,74.55,0.000000000000004,
,CUFF.40394.2
         (324 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61890 similar to UniRef100_A7P773 Cluster: Chromosome...   638   0.0  

>gnl|LJGI|TC61890 similar to UniRef100_A7P773 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (67%)
          Length = 923

 Score =  638 bits (322), Expect = 0.0
 Identities = 322/322 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcactccttcaactccaactaacctctcatgcactgtgttctctcccttccttctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  atgtcactccttcaactccaactaacctctcatgcactgtgttctctcccttccttctcc 139

                                                                       
Query: 61  aatagcttcagacccaacagaacctttcattgctctaagcgtctcaattttgctacaacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aatagcttcagacccaacagaacctttcattgctctaagcgtctcaattttgctacaacc 199

                                                                       
Query: 121 aatatcagagccgttggcactgtccctgagagggacttagagaccactgcaaccgacgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aatatcagagccgttggcactgtccctgagagggacttagagaccactgcaaccgacgag 259

                                                                       
Query: 181 ccaccgtctgttggcttcgcattcgtcagttctgtgttgctaccagatggaactccagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccaccgtctgttggcttcgcattcgtcagttctgtgttgctaccagatggaactccagat 319

                                                                       
Query: 241 atacactatcgctctgctactggcggtcagaagcttagggacataatgctggattccaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atacactatcgctctgctactggcggtcagaagcttagggacataatgctggattccaat 379

                                 
Query: 301 attgagctctatggcccctatg 322
           ||||||||||||||||||||||
Sbjct: 380 attgagctctatggcccctatg 401