Miyakogusa Predicted Gene
- Lj3g3v0247270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0247270.1 Non Chatacterized Hit- tr|I1MCR0|I1MCR0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40845
PE,91.11,0,START,Lipid-binding START; Homeobox,Homeodomain; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; HO,CUFF.40386.1
(1926 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79317 homologue to UniRef100_A7P7A6 Cluster: Chromoso... 1241 0.0
gnl|LJGI|TC73126 similar to UniRef100_A7P7A6 Cluster: Chromosome... 422 e-117
gnl|LJGI|TC70125 similar to UniRef100_A7PC25 Cluster: Chromosome... 60 5e-08
>gnl|LJGI|TC79317 homologue to UniRef100_A7P7A6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (30%)
Length = 642
Score = 1241 bits (626), Expect = 0.0
Identities = 639/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 661 gttgatctcccaaggcttgtccaaagttttctagatgctaatcaatggaaggaaatgttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgatctcccaaggcttgtccaaagttttctagatgctaatcaatggaaggaaatgttt 60
Query: 721 ccgtgtttgatatccaaagcagcaacagttgacatcatatgcaatggagaaggatctaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtgtttgatatccaaagcagcaacagttgacatcatatgcaatggagaaggatctaac 120
Query: 781 aggaacggtgcagtgcaactgatgtttgctgaactacaaatgctcacaccaatggtgccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaacggtgcagtgcaactgatgtttgctgaactacaaatgctcacaccaatggtgccc 180
Query: 841 acaagagaggtgtattttgtcaggtactgcaaacaattgagtggtgaacaatgggcaatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaagagaggtgtattttgtcaggtactgcaaacaattgagtggtgaacaatgggcaatc 240
Query: 901 gttgatgtatccatagacaaagtagaagacaacatcgacgcttccctcgtcaaatgcaga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttgatgtatccatagacaaagtagaagacaacatcgacgcttccctcgtcaaatgcaga 300
Query: 961 aaacgcccatccggttgcattattgaggacaagtcaaatggccattgcaaagtaatctgg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacgcccatccggttgcattattgaggacaagtcaaatggccattgcaaagtaatctgg 360
Query: 1021 gtagagcacttg-gaatgccagaagggagcagtccacacaatgtatcgcgccattgtgaa 1079
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtagagcacttgtgaatgccagaagggagcagtccacacaatgtatcgcgccattgtgaa 420
Query: 1080 cagtggcctggccttcggggcaaggcactggattgcgacattgcaacttcaatgcgaacg 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtggcctggccttcggggcaaggcactggattgcgacattgcaacttcaatgcgaacg 480
Query: 1140 tcttgttttcttcatggcaactaatgtccccatgaaggattccactggtgttgccacgtt 1199
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcttgttttcttcatggcaactaatgtccccatgaaggattccactggtgttgccacgtg 540
Query: 1200 ggctgggagaaaaagcattttgaagttggcacaaagaatgacatggggcttctgccatgc 1259
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggctgagagaaaaagcattttgaagttggcacaaagaatgacatggggcttctgccatgc 600
Query: 1260 agtcggggcatcaagcttccacacatggactaaggttaccag 1301
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtcggggcatcaagcttccacacatggactaaggttaccag 642
>gnl|LJGI|TC73126 similar to UniRef100_A7P7A6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 536
Score = 422 bits (213), Expect = e-117
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 1714 cctgatggcctagagtcaaggccattggtgattactacaaggaaggaagaaaagaacaca 1773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgatggcctagagtcaaggccattggtgattactacaaggaaggaagaaaagaacaca 60
Query: 1774 gagggaggatctttgtttacaatagcattccagatccttaccaatgcttctcctacagca 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagggaggatctttgtttacaatagcattccagatccttaccaatgcttctcctacagca 120
Query: 1834 aagttaacagtggaatctgtggactcggtcaacactcttgtatcatgtacattgagaaat 1893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagttaacagtggaatctgtggactcggtcaacactcttgtatcatgtacattgagaaat 180
Query: 1894 atcagaacaagtttacagtgtgaagatggatag 1926
|||||||||||||||||||||||||||||||||
Sbjct: 181 atcagaacaagtttacagtgtgaagatggatag 213
>gnl|LJGI|TC70125 similar to UniRef100_A7PC25 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 585
Score = 60.0 bits (30), Expect = 5e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 88 gtcaagttctggttccaaaatcgtcgaacccagatcaaggca 129
|||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 514 gtcaagttctggttccaaaaccgccgaacccagatgaaggca 555