Miyakogusa Predicted Gene

Lj3g3v0211980.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0211980.1 tr|Q84S31|Q84S31_VITVI Chitinase III OS=Vitis
vinifera PE=3 SV=1,64.97,0,no description,Glycoside hydrolase,
catalytic domain; seg,NULL; (Trans)glycosidases,Glycoside
hydrol,CUFF.40355.1
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66712 similar to UniRef100_Q9SC03 Cluster: Chitinase;...    72   3e-12

>gnl|LJGI|TC66712 similar to UniRef100_Q9SC03 Cluster: Chitinase; n=1; Trifolium
           repens|Rep: Chitinase - Trifolium repens (Creeping white
           clover), partial (90%)
          Length = 1103

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 160 aaatactcctatgtaatcatagccttcctgaacaaatttgggaatggcaagacccctgaa 219
           ||||||||| |||| |||||||||||||| ||||| || || |||||| | |||||||||
Sbjct: 178 aaatactcccatgtcatcatagccttcctcaacaagttcggcaatggccaaacccctgaa 237

                   
Query: 220 atgaacct 227
           ||||||||
Sbjct: 238 atgaacct 245