Miyakogusa Predicted Gene

Lj3g3v0211960.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0211960.1 Non Chatacterized Hit- tr|D7TBP6|D7TBP6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.33,0.000006,seg,NULL; UNCHARACTERIZED DUF292,NULL; Ist1,Domain
of unknown function DUF292, eukaryotic,CUFF.40353.1
         (1386 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS337112 weakly similar to UniRef100_A7PER0 Cluster: Ch...   131   1e-29

>gnl|LJGI|FS337112 weakly similar to UniRef100_A7PER0 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 722

 Score =  131 bits (66), Expect = 1e-29
 Identities = 252/314 (80%)
 Strand = Plus / Plus

                                                                       
Query: 127 attgctgagcttctcaggaatggccttgattacaatgcatatggaagggctgaagggctt 186
           |||||||||||||| |||| |||| |||||| | |||||||   ||||| ||||| ||||
Sbjct: 321 attgctgagcttcttaggattggctttgatttcgatgcatacaaaagggttgaagagctt 380

                                                                       
Query: 187 cttgttgagcaaaacatgtctgcttgctatgaactcattgcgaagtttgttggatgcata 246
            |  | |||||||| | ||   | |||||||| |||||||| |||||| ||| | | |||
Sbjct: 381 gtgttggagcaaaataagttatcctgctatgagctcattgcaaagtttattgaaagtata 440

                                                                       
Query: 247 tcggatcatgttcgatacctttgtaagcacaaggattgccctgatgaatgcaaggaagct 306
           || |||||| ||  | ||||   |||||| | |  |||||||||||||||||||||||||
Sbjct: 441 tcagatcatcttgaagacctaactaagcagaggatttgccctgatgaatgcaaggaagct 500

                                                                       
Query: 307 ataccatcactggtttatgctgcagcaaggttttctgatctgccggagctacgcgacatg 366
            |||||||| || | ||||| |||||||| ||  |||||||||||||| | || ||| | 
Sbjct: 501 gtaccatcattgatgtatgccgcagcaagattcgctgatctgccggagttgcgagacctc 560

                                                                       
Query: 367 agaacattgtttgcagagaaatttgggaattctcttgaaccttatatcagtaaagagttt 426
           ||| | |||||||| |||||||||| |||||| |||||||||| | | ||||||||||| 
Sbjct: 561 agagctttgtttgctgagaaatttgagaattcccttgaaccttttctaagtaaagagttg 620

                         
Query: 427 gtagagaagttgag 440
           || ||||| |||||
Sbjct: 621 gttgagaaattgag 634