Miyakogusa Predicted Gene
- Lj3g3v0201940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0201940.1 Non Chatacterized Hit- tr|I1MYH3|I1MYH3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13670 PE,84.33,0,U-box,U
box domain; KAP,NULL; seg,NULL; RING/U-box,NULL; ARM
repeat,Armadillo-type fold; no descript,CUFF.40352.1
(2310 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69482 similar to UniRef100_A7QBN6 Cluster: Chromosome... 831 0.0
gnl|LJGI|AU252019 weakly similar to UniRef100_A7QBN6 Cluster: Ch... 613 e-174
gnl|LJGI|TC66031 similar to UniRef100_A7QBN6 Cluster: Chromosome... 375 e-103
gnl|LJGI|TC66836 weakly similar to UniRef100_O48700 Cluster: F3I... 367 e-100
gnl|LJGI|BW630690 similar to UniRef100_A7QBN6 Cluster: Chromosom... 345 8e-94
gnl|LJGI|TC82322 weakly similar to UniRef100_O48700 Cluster: F3I... 167 4e-40
gnl|LJGI|TC63760 153 6e-36
gnl|LJGI|BP080337 109 8e-23
gnl|LJGI|TC80485 70 7e-11
>gnl|LJGI|TC69482 similar to UniRef100_A7QBN6 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 604
Score = 831 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Plus
Query: 1 atgcgaatgatggatgttgctgaggttgaagaaaccctttttgcagcaagtgatgccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atgcgaatgatggatgttgctgaggttgaagaaaccctttttgcagcaagtgatgccaag 241
Query: 61 ctacatgtagaaatgtgcaggcgtctttctgcaatatattgcaaaatattgtcaatattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctacatgtagaaatgtgcaggcgtctttctgcaatatattgcaaaatattgtcaatattt 301
Query: 121 cctactttagaagcagctaggccgaggagcaaatccggaatccaggcattatgttcattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cctactttagaagcagctaggccgaggagcaaatccggaatccaggcattatgttcattg 361
Query: 181 catgtagcgttggagaagggaaagaatgttcttcagcactgctcagagtctagcaaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 catgtagcgttggagaagggaaagaatgttcttcagcactgctcagagtctagcaaactt 421
Query: 241 tacttggctataactggggattctgtacttctgaaatttgagaaggctaagtgtgctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tacttggctataactggggattctgtacttctgaaatttgagaaggctaagtgtgctctt 481
Query: 301 gaagatagtcttaaacaggtggaagatattgttcctcaatctattgggtgtcagattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaagatagtcttaaacaggtggaagatattgttcctcaatctattgggtgtcagattgat 541
Query: 361 gaaattgtgaatgaacttactggtttggaatttgcacttgacccattggagaagcttgtt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 542 gaaattgtgaatgaacttactggtttggaatttgcacttgacccattggagaagcttggt 601
Query: 421 ggg 423
|||
Sbjct: 602 ggg 604
>gnl|LJGI|AU252019 weakly similar to UniRef100_A7QBN6 Cluster: Chromosome chr1
scaffold_75, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_75, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 329
Score = 613 bits (309), Expect = e-174
Identities = 326/329 (99%), Gaps = 2/329 (0%)
Strand = Plus / Plus
Query: 1595 cagccgccctgtatctgaatcttacttgccatgaagaagccaagc-aaatagt-cggaac 1652
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 1 cagccgccctgtatctgaatcttacttgccatgaagaagccaagccaaatagttcggaac 60
Query: 1653 gagtcaggctgtccaattcctaatccatattcttcaatccaatactgaagtccagtgcaa 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagtcaggctgtccaattcctaatccatattcttcaatccaatactgaagtccagtgcaa 120
Query: 1713 gctagattccctccatgcactctataatctttctactgtgtcctctaatatttcatacct 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctagattccctccatgcactctataatctttctactgtgtcctctaatatttcatacct 180
Query: 1773 cctttcatcaggcatcatgaatggtctacagtcccttcttgtaggccaggatgactccat 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctttcatcaggcatcatgaatggtctacagtcccttcttgtaggccaggatgactccat 240
Query: 1833 gtggacagaaaagtgcattgctgttttgataaacttggctgtttctcaagttggaagaga 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtggacagaaaagtgcattgctgttttgataaacttggctgtttctcaagttggaagaga 300
Query: 1893 agaaattatgtgtactccgggactcatag 1921
|||||| ||||||||||||||||||||||
Sbjct: 301 agaaataatgtgtactccgggactcatag 329
>gnl|LJGI|TC66031 similar to UniRef100_A7QBN6 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 927
Score = 375 bits (189), Expect = e-103
Identities = 475/569 (83%), Gaps = 1/569 (0%)
Strand = Plus / Plus
Query: 5 gaatgatggatgttgctgaggttgaagaaaccctttttgcagcaagtgatgccaagctac 64
|||||||||||| ||||| |||||||||| || ||||| || |||||||||||| |||
Sbjct: 354 gaatgatggatgcagctgaagttgaagaaaatctgtttgctgctagtgatgccaagttac 413
Query: 65 atgtagaaatgtgcaggcgtctttctgcaatatattgcaaaatattgtcaatatttccta 124
||| | ||||||||| | ||||||| ||||||||||||| | ||||| |||||||||
Sbjct: 414 atggacaaatgtgcaaggctctttctataatatattgcaaagtgttgtcgatatttcctt 473
Query: 125 ctttagaagcagctaggccgaggagcaaatccggaatccaggcattatgttcattgcatg 184
| ||||||| || ||||| |||| ||| | ||||| |||||| | ||||| || || |
Sbjct: 474 ccgtagaagcggcgaggcctcggagtaaaactggaattcaggcactgtgttcgttacacg 533
Query: 185 tagcgttggagaagggaaagaatgttcttcagcactgctcagagtctagcaaactttact 244
|||| || ||||| | |||| ||||||||| ||||||||||| | || |||||||| |
Sbjct: 534 tagctttagagaaagctaagactgttcttcaacactgctcagaatgcagtaaactttatt 593
Query: 245 tggctataactggggattctgtacttctgaaatttgagaaggctaagtgtgctcttgaag 304
|||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 594 tggctataactggggattctgttcttctaaaatttgagaaggctaaatgtgcgcttgaag 653
Query: 305 atagtcttaaacaggtggaagatattgttcctcaatctattgggtgtcagattgatgaaa 364
||||||||| || ||| |||||||||||||| |||||||||||||||||| || | || |
Sbjct: 654 atagtcttagacgggtcgaagatattgttccacaatctattgggtgtcaggttcaggaga 713
Query: 365 ttgtgaatgaacttactggtttggaatttgcacttgacccattggagaagcttgttgggg 424
||||||||||| || || |||||||||||||||| |||| ||||||| ||||| |
Sbjct: 714 ttgtgaatgaatttgagtgtgtggaatttgcacttgatccatcagagaagcaagttggcg 773
Query: 425 atgatttaattgcattgcttcaacaggagagaaagtttaacaactcaaatg-agagtagt 483
||||||| ||||||||||| || |||| |||||||||||| |||| |||| | |||| |
Sbjct: 774 atgatttgattgcattgctccagcaggggagaaagtttaatgactctaatgaaaagtaat 833
Query: 484 gaacttgaatgttttcatctttctgctacaagacttggaatcacctcttcaagagtggct 543
|| ||||||| |||||| | |||||||||||||||||||||| |||||||||| |||
Sbjct: 834 gagcttgaatcttttcaccaggctgctacaagacttggaatcacatcttcaagagcagct 893
Query: 544 ctttctgaaagaagagctctcaaaaaact 572
||| | |||||||| |||||||| |||||
Sbjct: 894 cttaccgaaagaagggctctcaagaaact 922
>gnl|LJGI|TC66836 weakly similar to UniRef100_O48700 Cluster: F3I6.27 protein; n=1;
Arabidopsis thaliana|Rep: F3I6.27 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 1146
Score = 367 bits (185), Expect = e-100
Identities = 686/851 (80%), Gaps = 4/851 (0%)
Strand = Plus / Plus
Query: 1458 gatggctcaggaaagtggagctatggctctgttcaacctggctgtgaataacaacagaaa 1517
|||||||||||||| |||||| |||||||| |||||||| ||||||||||||||| | ||
Sbjct: 4 gatggctcaggaaattggagcaatggctctcttcaaccttgctgtgaataacaacgggaa 63
Query: 1518 taaggaaatcatgatatctgtgggaatcctatcattgttggaggaaatgattttgaaacc 1577
||||||||| ||| |||| | ||| | | || |||||||||||||||||| || |
Sbjct: 64 taaggaaatgatgttatcagctggagtattgccagtgttggaggaaatgatttctaacac 123
Query: 1578 tcactcatacggttgtgcagccgccctgtatctgaatcttacttgccatgaagaagccaa 1637
| || || |||| |||| |||| || ||||||||||| |||||| ||||||||||||
Sbjct: 124 tagttcttatggttctgcaaccgctctatatctgaatctctcttgccttgaagaagccaa 183
Query: 1638 gcaaatagtcggaacgagtcaggctgtccaattcctaatccatattcttcaatccaatac 1697
|| || | || |||||||||||||| || ||||| | ||| |||||||||| | |
Sbjct: 184 gcctatgattggtacgagtcaggctgtacagttcctcacccagcttcttcaatctgactc 243
Query: 1698 tgaagtccagtgcaagctagattccctccatgcactctataatctttctactgtgtcctc 1757
||| | || ||||||| |||||| |||||||| |||||||| |||||||| ||||| |
Sbjct: 244 tgatattcaatgcaagcaagattctctccatgctctctataacctttctaccgtgtctac 303
Query: 1758 taatatttcatacctcctttcat-caggcatcatgaatggtctacagtcccttcttgtag 1816
||||| ||||||||||||||| | ||||| || ||||| || || |||||||||||||
Sbjct: 304 caatatcccatacctcctttcattccggcattatcaatggcctgcaatcccttcttgtag 363
Query: 1817 gccaggatgactccatgtggacagaaaagtgcattgctgttttgataaacttggctgttt 1876
|||| ||| | | ||||||||||||| ||||| |||||| |||||||||| ||| ||
Sbjct: 364 atcagggtgattgcgtgtggacagaaaaatgcatagctgttctgataaacttagctactt 423
Query: 1877 ctcaagttggaagagaagaaattatgtgtactccgggactcataggcgcactggcttcga 1936
|||||| |||||| || ||||| | | |||| |||||||| ||||| ||||||| |
Sbjct: 424 ctcaagctggaagggaggaaatggtatcagctcctggactcatcagcgcattggcttcca 483
Query: 1937 tactggatactggtgaactcctagagcaggagcaagctgtttattgtctcctaattttgt 1996
|| |||| | |||||| ||| ||| |||||||||||| | | |||||| || |||||||
Sbjct: 484 tattggacattggtgagctcatagtgcaggagcaagcagcctcttgtcttcttattttgt 543
Query: 1997 gtaacaggaatgagaaatgttgtgagatggtccttcaagaaggagttatacctgcgctgg 2056
| ||||| | ||||||||||| ||||||||||| |||||||| ||||| ||||| ||||
Sbjct: 544 gcaacagaagcgagaaatgttgcgagatggtcctgcaagaaggggttatccctgcactgg 603
Query: 2057 tctcgatatcagtgaatgggacgtcaagagggagagaaaaagctcagaagctcttgatgc 2116
| || ||||||||||||||||| ||||||| || || ||||||||||| ||||||||||
Sbjct: 604 tgtcaatatcagtgaatgggaccccaagaggaagggagaaagctcagaaactcttgatgc 663
Query: 2117 tcttcagagagcagcgacaacgagaccattcacctgctaaggcggcacatcaatgcaaac 2176
| ||| | ||||||||||||||||||||||| || | | | | ||||| | | ||
Sbjct: 664 ttttccgggagcagcgacaacgagaccattcgccag---tcgagactcatcagtccccac 720
Query: 2177 ctgaaactagtgatttgtccatgcctcctcctgaagagaaacctctatgtaagtcaatgt 2236
|||||||| |||||||||| |||| ||| |||| |||||| |||| ||||| ||||
Sbjct: 721 ctgaaactggtgatttgtctgtgccgcctgctgagatgaaaccgttatgcaagtccatgt 780
Query: 2237 ctagaagaagggtggggaaagcttttagctttctctggaaaagcaagagctattctgtct 2296
||||||||| | ||||| |||| ||||| ||||||||| ||||||||||||||| |
Sbjct: 781 ctagaagaaagacaatgaaaggttttggctttttctggaaaaccaagagctattctgttt 840
Query: 2297 accagtgttaa 2307
|||||||||||
Sbjct: 841 accagtgttaa 851
>gnl|LJGI|BW630690 similar to UniRef100_A7QBN6 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 459
Score = 345 bits (174), Expect = 8e-94
Identities = 377/444 (84%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 888 tgatcctgtcataattgcttctgggcaaacatatgaaagggtttgtatagaaaagtggtt 947
||||||||| || ||||||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 9 tgatcctgttatcattgcttctgggcaaacttatgaaagggtttgcatagagaaatggtt 68
Query: 948 cagtgatgggcacaacacctgtccaaagactcggcagaaactttcacatctttatttgac 1007
|||||||||||| ||||| || |||||||| | || |||||| |||||||| ||||||
Sbjct: 69 cagtgatgggcataacacgtgcccaaagacccaacaaaaacttcaacatctttgtttgac 128
Query: 1008 tcctaattactgtgttaagggccttgtggcaagttggtgtgaacagaatggagttcctat 1067
||||||||||||||||||||| ||||| || |||||||||||||| ||||| ||||||||
Sbjct: 129 tcctaattactgtgttaagggtcttgttgctagttggtgtgaacaaaatggtgttcctat 188
Query: 1068 tcctgaaggtcctccggaatctcttgattttaactactggagattggcattatcggattc 1127
||||||||| ||||| |||||||||||| |||||||||||||||| | |||||| | ||
Sbjct: 189 tcctgaagggcctcctgaatctcttgatcttaactactggagattagtattatccgggtc 248
Query: 1128 tgagtccatgaatacaagatctgtaaacagtgtcaactcttgcaaaatgaagtgtgtcaa 1187
||| || | ||| ||||||||||||| ||||||||||||| ||| ||| |||||||
Sbjct: 249 tgaatctacaaattcaagatctgtaaatagtgtcaactcttacaagtcgaaaggtgtcaa 308
Query: 1188 agttgttcctctagaagatagcggtgtctcagtgcaaactgagggagatgcaaccgaaag 1247
||| |||||||||||||| || ||| ||| || | || ||| |||| ||| ||| ||||
Sbjct: 309 agtggttcctctagaagagagtggtatcttagaggaatctgggggaaatggaactgaaat 368
Query: 1248 tttgtctgcacaagaggaagaatatg---agcagtattttagttttctgaaagtattgac 1304
| ||||||||||||||||||| || ||||||||||||||||||| ||||| |||||
Sbjct: 369 tgtgtctgcacaagaggaagatactgagcagcagtattttagttttctaaaagtcttgac 428
Query: 1305 tgaagggaataattggaagaggaa 1328
| ||||| ||||||||||||||
Sbjct: 429 tcgggggaacaattggaagaggaa 452
>gnl|LJGI|TC82322 weakly similar to UniRef100_O48700 Cluster: F3I6.27 protein; n=1;
Arabidopsis thaliana|Rep: F3I6.27 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (4%)
Length = 1305
Score = 167 bits (84), Expect = 4e-40
Identities = 221/264 (83%), Gaps = 2/264 (0%)
Strand = Plus / Plus
Query: 1251 gtctgcacaagaggaagaatatgagcagtattttagttttctgaaagtattgactgaagg 1310
|||||||||||||||||| |||| |||||||||||||||| ||||| |||||| | ||
Sbjct: 699 gtctgcacaagaggaagatactgagtagtattttagttttctaaaagtcttgactaaggg 758
Query: 1311 gaataattggaagaggaagtgtaaagtggtagaacagttaaggctgttgctgcgggatga 1370
||| |||||||||| ||| ||| || |||| ||| ||| ||||||||||||| |||||||
Sbjct: 759 gaacaattggaagatgaaatgtgaaatggtggaatagtaaaggctgttgctgagggatga 818
Query: 1371 tgaagaagccaggatttttatgggggctaatggatttgttgaagcacttatgcagttttt 1430
|| |||||||| |||||||||||| ||||| | ||||||||||| | | |||||||||
Sbjct: 819 tgtagaagccaagatttttatgggagctaagag-tttgttgaagcccctttgcagtttta 877
Query: 1431 gctatcagctgtgcgtgaagggtgttcgatggctcaggaaagtggagctatggctctgtt 1490
||||||||||| |||||| || | |||||||||||| ||||| || ||||| ||
Sbjct: 878 ta-atcagctgtgcatgaaggaaatttggtggctcaggaaattggagaaattgctctctt 936
Query: 1491 caacctggctgtgaataacaacag 1514
|||||| ||||||||||| |||||
Sbjct: 937 caaccttgctgtgaataagaacag 960
>gnl|LJGI|TC63760
Length = 1257
Score = 153 bits (77), Expect = 6e-36
Identities = 221/265 (83%), Gaps = 3/265 (1%)
Strand = Plus / Plus
Query: 1251 gtctgcacaagaggaagaatatgagcagtattttagttttctgaaagtattgactgaagg 1310
|||||||||||||||||| |||| |||||||||||||||| ||||| |||||| | ||
Sbjct: 415 gtctgcacaagaggaagatactgagtagtattttagttttctaaaagtcttgactaaggg 474
Query: 1311 gaataattggaagaggaagtgtaaagtggtagaacagttaaggctgttgctgcgggatga 1370
||| |||||||||| ||| ||| || |||| ||| ||| ||||||||||||| |||||||
Sbjct: 475 gaacaattggaagatgaaatgtgaaatggtggaatagtaaaggctgttgctgagggatga 534
Query: 1371 tgaagaagccaggatttttatgggggctaatggatttgttgaagcacttatgcagttttt 1430
|| |||||||| |||||||||||| ||||| | ||||||||||| | | |||||||||
Sbjct: 535 tgtagaagccaagatttttatgggagctaagag-tttgttgaagcccctttgcagtttta 593
Query: 1431 gctatcagctgtgcgtgaagggtgttcgatggctcaggaaagtggagctatggctctgtt 1490
||||||||||| |||||| || | |||||||| ||| ||||| || ||||| ||
Sbjct: 594 ta-atcagctgtgcatgaaggaaatttggtggctcag-aaattggagaaattgctctctt 651
Query: 1491 caacctggctgtgaataacaacaga 1515
|||||| ||||||||||| ||||||
Sbjct: 652 caaccttgctgtgaataagaacaga 676
>gnl|LJGI|BP080337
Length = 469
Score = 109 bits (55), Expect = 8e-23
Identities = 112/131 (85%)
Strand = Plus / Minus
Query: 1251 gtctgcacaagaggaagaatatgagcagtattttagttttctgaaagtattgactgaagg 1310
|||||||||||||||||| |||| |||||||||||||||| ||||| |||||| | ||
Sbjct: 316 gtctgcacaagaggaagatactgagtagtattttagttttctaaaagtcttgactaaggg 257
Query: 1311 gaataattggaagaggaagtgtaaagtggtagaacagttaaggctgttgctgcgggatga 1370
||| |||||||||| ||| ||| || |||| ||| ||| |||||||||| || |||||||
Sbjct: 256 gaacaattggaagatgaaatgtgaaatggtggaatagtaaaggctgttgttgagggatga 197
Query: 1371 tgaagaagcca 1381
|| ||||||||
Sbjct: 196 tgtagaagcca 186
>gnl|LJGI|TC80485
Length = 505
Score = 69.9 bits (35), Expect = 7e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2253 gaaagcttttagctttctctggaaaagcaagagctattctgtctaccagtgttaa 2307
||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||||
Sbjct: 52 gaaaggttttggctttttctggaaaaccaagagctattctgtttaccagtgttaa 106