Miyakogusa Predicted Gene

Lj3g3v0200850.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0200850.1 Non Chatacterized Hit- tr|B3SC24|B3SC24_TRIAD
Putative uncharacterized protein OS=Trichoplax
adhaere,34.33,3.2,seg,NULL,CUFF.40344.1
         (293 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024735 similar to UniRef100_A9XS93 Cluster: NADH dehy...   285   7e-77

>gnl|LJGI|GO024735 similar to UniRef100_A9XS93 Cluster: NADH dehydrogenase subunit 5;
           n=1; Erynnis propertius|Rep: NADH dehydrogenase subunit
           5 - Erynnis propertius (propertius duskywing), partial
           (6%)
          Length = 637

 Score =  285 bits (144), Expect = 7e-77
 Identities = 154/156 (98%), Gaps = 1/156 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacgttgttccgcaccatcgttaccaactatacgcccatgacggaagataacgctacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  atgacgttgttccgcaccatcgttaccaactatacgcccatgacggaagataacgctacg 102

                                                                       
Query: 61  gatgatgatgcgattcataacctttgtcaccaactatcccacaattttctcttcttcgta 120
           |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 103 gatgatgacgcgattcataacctttgtcaccaactat-ccacaattttctcttcttcgta 161

                                               
Query: 121 ttgtcattcaatcccatcgccaccacattggatagt 156
           ||||||||||||||||||||||||||||||||||||
Sbjct: 162 ttgtcattcaatcccatcgccaccacattggatagt 197