Miyakogusa Predicted Gene
- Lj3g3v0200830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0200830.1 tr|A9RES0|A9RES0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65167
,35.33,3e-16,BAH,Bromo adjacent homology (BAH) domain;
seg,NULL,NODE_60913_length_2519_cov_13.786423.path2.1
(1926 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57835 1697 0.0
gnl|LJGI|FS335092 similar to UniRef100_A7P5F6 Cluster: Chromosom... 975 0.0
gnl|LJGI|BW598578 121 2e-26
gnl|LJGI|DC596088 similar to UniRef100_A7P5F6 Cluster: Chromosom... 68 2e-10
>gnl|LJGI|TC57835
Length = 856
Score = 1697 bits (856), Expect = 0.0
Identities = 856/856 (100%)
Strand = Plus / Plus
Query: 580 ttagacgagaaagaagttagggggaacctcatggcaagtaatgaagcggtggctctttcg 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagacgagaaagaagttagggggaacctcatggcaagtaatgaagcggtggctctttcg 60
Query: 640 agtgaagaaaacagcaggcctttgattgaaaaaccaggtggaaagtgttttgacacatta 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgaagaaaacagcaggcctttgattgaaaaaccaggtggaaagtgttttgacacatta 120
Query: 700 gttagagataatgcttattctaagccatcgttgggagaaaaacctacctcgagctttggc 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttagagataatgcttattctaagccatcgttgggagaaaaacctacctcgagctttggc 180
Query: 760 ttaaagaaatcaagtaaatctaatgctttgaatactagttccggtgacaagacctttcct 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaaagaaatcaagtaaatctaatgctttgaatactagttccggtgacaagacctttcct 240
Query: 820 caagctaaagaaaatgggactcatagggcttctctggttaaacaaaaatcatctactaaa 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caagctaaagaaaatgggactcatagggcttctctggttaaacaaaaatcatctactaaa 300
Query: 880 ctatcacttggttccaaagatgcctttgaaatgaaggaaagccctagaatagggggaaat 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctatcacttggttccaaagatgcctttgaaatgaaggaaagccctagaatagggggaaat 360
Query: 940 gtctctacggggaagaccactccaaggtctaaggttgattttgaaaaggatgaacgtgtg 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtctctacggggaagaccactccaaggtctaaggttgattttgaaaaggatgaacgtgtg 420
Query: 1000 gttgatggtgtcactgatggggaaattaacaagcgattggtcggggacaaagcttatgag 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgatggtgtcactgatggggaaattaacaagcgattggtcggggacaaagcttatgag 480
Query: 1060 aaaggaaaacatggtggtttgagtaaagttcagagtgagaagataaagactaacgtgcaa 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaggaaaacatggtggtttgagtaaagttcagagtgagaagataaagactaacgtgcaa 540
Query: 1120 aatcgaagaacgcatgatgatgatgtgaagagtgtacctccatcttcatcaaaggatgaa 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatcgaagaacgcatgatgatgatgtgaagagtgtacctccatcttcatcaaaggatgaa 600
Query: 1180 tataagcttcaacgagaaaagggtttttgtgatgtggaggaagtcccttccaaaaagcga 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tataagcttcaacgagaaaagggtttttgtgatgtggaggaagtcccttccaaaaagcga 660
Query: 1240 aaggttgacatgaagtcaacaaaagtctctggtgacaagccgtgtaaagaagcttctaca 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaggttgacatgaagtcaacaaaagtctctggtgacaagccgtgtaaagaagcttctaca 720
Query: 1300 attcctcagagcgtggatcacaagctagattccggtgtaacgaaagttactcgacgccct 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attcctcagagcgtggatcacaagctagattccggtgtaacgaaagttactcgacgccct 780
Query: 1360 gataggagcaagtggtttaaggcgatgccttgggaggataaatcgaaaactgcttatgag 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gataggagcaagtggtttaaggcgatgccttgggaggataaatcgaaaactgcttatgag 840
Query: 1420 caaagaagagtcgttc 1435
||||||||||||||||
Sbjct: 841 caaagaagagtcgttc 856
>gnl|LJGI|FS335092 similar to UniRef100_A7P5F6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 752
Score = 975 bits (492), Expect = 0.0
Identities = 492/492 (100%)
Strand = Plus / Plus
Query: 1 atggcggaagcaggggaagaaccggaggaggagcttgagttcaaatggggcaagccgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcggaagcaggggaagaaccggaggaggagcttgagttcaaatggggcaagccgaga 320
Query: 61 ggggttggtgtgaagaacaagaatgtgcgattttacgagtcgtttacttacgacggtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggttggtgtgaagaacaagaatgtgcgattttacgagtcgtttacttacgacggtgtg 380
Query: 121 gactacgctctctacgattccgtgttccttttcaaggagggtgaacccgagcctttcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gactacgctctctacgattccgtgttccttttcaaggagggtgaacccgagcctttcatc 440
Query: 181 gggaagctcatcaagatttgggagagtgctgataagagcaagaaagttagggttctgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggaagctcatcaagatttgggagagtgctgataagagcaagaaagttagggttctgtgg 500
Query: 241 tattttcgaccctgtgagattctcaatttcttggatggatatgaaacgcttgagaatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattttcgaccctgtgagattctcaatttcttggatggatatgaaacgcttgagaatgag 560
Query: 301 ttgtttttggcatctggtgaaggattagggcttgcaaatgtcaatcctctggaagctatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtttttggcatctggtgaaggattagggcttgcaaatgtcaatcctctggaagctatt 620
Query: 361 gctggcaaatgcattgttgtttgcatttctaaggacaacaggaatccacagttatcagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctggcaaatgcattgttgtttgcatttctaaggacaacaggaatccacagttatcagat 680
Query: 421 gaagaacttcaaatggctgattttgttttctctcattgctttgatgttggaaagtgtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaagaacttcaaatggctgattttgttttctctcattgctttgatgttggaaagtgtgaa 740
Query: 481 atatcggataag 492
||||||||||||
Sbjct: 741 atatcggataag 752
>gnl|LJGI|BW598578
Length = 386
Score = 121 bits (61), Expect = 2e-26
Identities = 145/173 (83%)
Strand = Plus / Plus
Query: 367 aaatgcattgttgtttgcatttctaaggacaacaggaatccacagttatcagatgaagaa 426
||||||| |||||||||||||||||| |||| ||||||| ||||| ||||||||||| |
Sbjct: 73 aaatgcagtgttgtttgcatttctaaagacatcaggaattcacagccatcagatgaagca 132
Query: 427 cttcaaatggctgattttgttttctctcattgctttgatgttggaaagtgtgaaatatcg 486
||||||| |||||||||||| ||| || || |||||||||||| || | |||||| |
Sbjct: 133 cttcaaaaggctgattttgtattccatcgtttctttgatgttgggcagcgcaaaatattg 192
Query: 487 gataagatagatgataagatcgctggagttgaagttaaaaatatttttaacaa 539
|||| |||||||| |||| |||||| ||||||| ||| |||| ||||||||
Sbjct: 193 gatactatagatgacaagagtgctggaattgaagtaaaagatatatttaacaa 245
>gnl|LJGI|DC596088 similar to UniRef100_A7P5F6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 415
Score = 67.9 bits (34), Expect = 2e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 298 gagttgtttttggcatctggtgaaggattagggcttgcaaatgtcaatcctctggaagct 357
||||||||||| || | ||||||| | | || ||||| |||||||| ||||||||||||
Sbjct: 330 gagttgttttttgcgtgtggtgaaagccttggacttgccaatgtcaaccctctggaagct 389
Query: 358 attgctggcaaatgcattgttgtttg 383
||||| || ||||||| |||||||||
Sbjct: 390 attgcaggaaaatgcaatgttgtttg 415