Miyakogusa Predicted Gene
- Lj3g3v0139610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0139610.1 Non Chatacterized Hit- tr|I1MCM5|I1MCM5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,92.25,0,COATOMER BETA
SUBUNIT,NULL; COATOMER,NULL; GPROTEINBRPT,G-protein beta WD-40 repeat;
WD_REPEATS_2,WD,CUFF.40458.1
(2607 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75632 homologue to UniRef100_A7P7E9 Cluster: Chromoso... 1727 0.0
gnl|LJGI|TC66692 similar to UniRef100_A7P7E9 Cluster: Chromosome... 785 0.0
gnl|LJGI|TC59250 homologue to UniRef100_A7P7E9 Cluster: Chromoso... 747 0.0
gnl|LJGI|AV410387 homologue to UniRef100_A7P7E9 Cluster: Chromos... 464 e-129
gnl|LJGI|TC62201 similar to UniRef100_A7P7E9 Cluster: Chromosome... 280 4e-74
gnl|LJGI|GO025122 similar to UniRef100_Q9C827 Cluster: Coatomer ... 165 2e-39
gnl|LJGI|AV781170 homologue to UniRef100_A7P7E9 Cluster: Chromos... 147 4e-34
gnl|LJGI|BP056159 similar to UniRef100_A7P7E9 Cluster: Chromosom... 96 1e-18
gnl|LJGI|BP065229 78 3e-13
gnl|LJGI|TC77037 similar to UniRef100_A7P7E9 Cluster: Chromosome... 74 5e-12
>gnl|LJGI|TC75632 homologue to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 1199
Score = 1727 bits (871), Expect = 0.0
Identities = 883/886 (99%), Gaps = 2/886 (0%)
Strand = Plus / Plus
Query: 1 atggccaaatcttttgaggttactgagttaccagttagatcagccaagtttgttgcacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atggccaaatcttttgaggttactgagttaccagttagatcagccaagtttgttgcacgc 373
Query: 61 aaacagtgggttgttgctggagcagatgatatgttcatccgtgtctataattacaacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaacagtgggttgttgctggagcagatgatatgttcatccgtgtctataattacaacaca 433
Query: 121 atggataaagtcaaagtatttgaagcacatacagattacattaggtgtgtggcagttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atggataaagtcaaagtatttgaagcacatacagattacattaggtgtgtggcagttcat 493
Query: 181 cctacccttccttatgtgctatcatcatctgatgatatgctcattaagctttgggattgg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cccacccttccttatgtgctatcatcatctgatgatatgctcattaagctttgggattgg 553
Query: 241 gaaaagggctggatttgtacccagatatttgaaggacattctcattatgtcatgcaagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaaaagggctggatttgtacccagatatttgaaggacattctcattatgtcatgcaagtg 613
Query: 301 acatttaatcctaaagatacaaacacctttgccagtgcatctcttgatcgaaccataaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 acatttaatcctaaagatacaaacacctttgccagtgcatctcttgatcgaaccataaag 673
Query: 361 atctggaatcttggctctcctgaccctaattttacattggatgcccatcagaaaggagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atctggaatcttggctctcctgaccctaattttacattggatgcccatcagaaaggagtg 733
Query: 421 aattgcgttgattactttacaggtggtgataagccttatctaatcactggttctgatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aattgcgttgattactttacaggtggtgataagccttatctaatcactggttctgatgat 793
Query: 481 cacactgcaaaggtatgggattatcagaccaaaagttgtgtccagactctagatggt--c 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 794 cacactgcaaaggtatgggattatcagaccaaaagttgtgtccagactctagatggtcac 853
Query: 539 acacacacaatgtgtctgctgtatgctttcatcctgaacttcctataatcattactggtt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 acacacacaatgtgtctgctgtatgctttcatcctgaacttcctataatcattactggtt 913
Query: 599 ctgaggatggtacagtacgcatatggcactcgacaacttacaggcttgagaacacattga 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 ctgaggatggtacagtacgcatatggcactcgacaacttacaggcttgagaacacattga 973
Query: 659 actacggccttgaaagagtttgggctattggatacttgaagagttcacgtcgggttgtga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 actacggccttgaaagagtttgggctattggatacttgaagagttcacgtcgggttgtga 1033
Query: 719 ttggctatgacgaaggaacaattatggtcaaacttggtcgagaagtacctgtggctagca 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 ttggctatgacgaaggaacaattatggtcaaacttggtcgagaagtacctgtggctagca 1093
Query: 779 tggacaacagtgggaaaattatttgggctaaacataatgaaattcagactgtcaatataa 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 tggacaacagtgggaaaattatttgggctaaacataatgaaattcagactgtcaatataa 1153
Query: 839 agagcataggagtagatgcggaggttgctgatggagaaaggttgcc 884
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 agagcataggagtagatgcggaggttgctgatggagaaaggttgcc 1199
>gnl|LJGI|TC66692 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 1260
Score = 785 bits (396), Expect = 0.0
Identities = 628/704 (89%), Gaps = 1/704 (0%)
Strand = Plus / Plus
Query: 1714 aacagtgtggctcgtttcctggaatcacgagggatgatagaagatgctcttgaagtagct 1773
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 4 aacagtgtggctcgtttcctggaatcgagagggatgatagaggatgctcttgaagtagct 63
Query: 1774 actgacccggactatagatttgatctagcaatacaacttggaagattagaggttgcaaag 1833
|||||||| ||||| || || |||||||| || || ||||| | |||||| |||||||||
Sbjct: 64 actgaccctgactacaggttcgatctagccatgcagcttgggaaattagaagttgcaaag 123
Query: 1834 agcattgcaatagaagtgcagagtgagtcaaaatggaagcagttgggagagctagctatg 1893
| ||||| | |||||||||||||||| | |||||||||||||||||||| |||| |||
Sbjct: 124 ggtattgcgacagaagtgcagagtgagcctaaatggaagcagttgggagaattagccatg 183
Query: 1894 tctactggaaagttagaaatggctgaggaatgtttaaagcatgcaaaggatttgagtgga 1953
||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 184 tcttctggaaagttagaaatggctgaggaatgcttaaaacatgcaatggatttgagtggg 243
Query: 1954 ttattactgctgtattcttctttaggcgatgctgaaggaatatcaaatcttgcaaccctt 2013
|| || ||||| |||||||||||||| ||||| ||||| ||||||| |||||||| |||
Sbjct: 244 ttgttgctgctatattcttctttaggagatgccgaagggttatcaaaacttgcaactctt 303
Query: 2014 gctaaagagcaagggaagaacaatgtcgcattcctgtgcttatttatgttgggtaaactt 2073
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 304 gctaaagagcaagggaagaacaatgttgcattcctttgcttatttatgttgggtaaactt 363
Query: 2074 gaagactgtcttcaactattggtagaaagcaatcggattccagaggcagctttaatggct 2133
||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 364 gaagactgtcttcaactgttggtagaaagtaatcggattccggaggctgctttaatggct 423
Query: 2134 agatcatatctcccaagtaaggtctctgagattgtggcaatttggaggaaagatctcaac 2193
|||| ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 424 cgatcttatctcccaagcaa-gtctcagagatagtggcaatttggagaaaagatctcaac 482
Query: 2194 aaggttaatcctaaagctgctgaatctttggctgatcctgaggaatatccaaatttgttt 2253
||||||||||| || ||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 483 aaggttaatccaaaggctgctgaatcattggctgatcctgaggagtatcctaatttgttc 542
Query: 2254 gaagactggcaagtcgcccttgctgttgaatctaaagctatagaaacaaggaatgttgac 2313
||||| |||||||| || |||||||||||||||||| || ||||||||||| |||| ||
Sbjct: 543 gaagattggcaagttgctcttgctgttgaatctaaatctgtagaaacaaggggtgtttac 602
Query: 2314 cctcctgcagagcagtacatcagccatgctgacaaatcacatgtaacccttgttgaagct 2373
|||||||| ||| |||| ||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 603 cctcctgcggaggagtatgtcaaccatgctggtaaatcacatgtaaccctagttgaagct 662
Query: 2374 ttcagaaacatgcagattgaagaagaggagcctcttgagaatgg 2417
|||||||||||||||||||||| || | ||||||||||||||
Sbjct: 663 ttcagaaacatgcagattgaaggggaacaacctcttgagaatgg 706
>gnl|LJGI|TC59250 homologue to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 787
Score = 747 bits (377), Expect = 0.0
Identities = 473/505 (93%)
Strand = Plus / Plus
Query: 1 atggccaaatcttttgaggttactgagttaccagttagatcagccaagtttgttgcacgc 60
|||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 283 atggccaagtcttttgaggttactgagttaccagttaggtcagccaagtttattgcacgc 342
Query: 61 aaacagtgggttgttgctggagcagatgatatgttcatccgtgtctataattacaacaca 120
|| |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 343 aagcagtgggttgttgctggagcagatgatatgtttattcgtgtatataattacaacaca 402
Query: 121 atggataaagtcaaagtatttgaagcacatacagattacattaggtgtgtggcagttcat 180
||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 403 atggataaagttaaagtatttgaggcccatacagattacatcaggtgtgtggcagtccat 462
Query: 181 cctacccttccttatgtgctatcatcatctgatgatatgctcattaagctttgggattgg 240
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cctactcttccttatgtgctgtcatcatctgatgatatgctcattaagctttgggattgg 522
Query: 241 gaaaagggctggatttgtacccagatatttgaaggacattctcattatgtcatgcaagtg 300
|||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 523 gaaaagggctggatctgtacccagatatttgaggggcattcacattatgtcatgcaagtg 582
Query: 301 acatttaatcctaaagatacaaacacctttgccagtgcatctcttgatcgaaccataaag 360
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 583 acatttaaccctaaagacacaaacacctttgccagtgcatctcttgatcgcaccataaag 642
Query: 361 atctggaatcttggctctcctgaccctaattttacattggatgcccatcagaaaggagtg 420
|| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 643 atttggaatcttggctctcctgaccctaattttacgttggatgcccatcaaaagggagtg 702
Query: 421 aattgcgttgattactttacaggtggtgataagccttatctaatcactggttctgatgat 480
||||| ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||
Sbjct: 703 aattgtgttgactactttacaggtggtgacaaaccttatctaattactggttctgatgat 762
Query: 481 cacactgcaaaggtatgggattatc 505
|| ||||| ||||||||||||||||
Sbjct: 763 caaactgccaaggtatgggattatc 787
>gnl|LJGI|AV410387 homologue to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (14%)
Length = 425
Score = 464 bits (234), Expect = e-129
Identities = 357/398 (89%)
Strand = Plus / Plus
Query: 1294 attgctagtgatacatcattctacatcctgaagtacaaccgtgatgttgtttcatcgcat 1353
|||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 11 attgctagtgattcatcattctacatcctgaagtacaatcgtgatgttgttgcatcatat 70
Query: 1354 ttagatagtggaagacccgtagatgaggaaggtgttgaagatgcttttgagctccttcat 1413
||||||||||||| || ||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 71 ttagatagtggaaacccagtagatgagcaaggtgttgaagatgcctttgagctccttcat 130
Query: 1414 gaaatgaatgaacgtgtcaggactggcatctgggttggggattgctttatctacaacaat 1473
||||||| ||||||||||||||| || ||||||||||| ||||| |||||||||| ||||
Sbjct: 131 gaaatgagtgaacgtgtcaggacgggtatctgggttggtgattgttttatctacagcaat 190
Query: 1474 tcctcttggagacttaattactgtgttggtggtgaggtaactacaatgttccatttggac 1533
|| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 191 tcttcttggaggcttaattactgtgttggtggtgaggtaactacaatgtttcatttggac 250
Query: 1534 cgccctatgtacttgttgggataccttgcaaaccaaagtcgggtttatttgattgacaaa 1593
|| |||||||||||||||||||| ||||| | ||||||| |||| || | || || |||
Sbjct: 251 cgtcctatgtacttgttgggatatcttgccagccaaagtagggtctaccttatagataaa 310
Query: 1594 gagtttaatgttatgggatacacactgcttttaagcttgattgaatacaaaacacttgtg 1653
||||| || ||||| ||||||||| ||||||||||||||||||| ||||| || ||||||
Sbjct: 311 gagttcaacgttatcggatacacattgcttttaagcttgattgagtacaagactcttgtg 370
Query: 1654 atgcgtggcgatttagaaagggccagtgaagttctacc 1691
|||||||| ||||| |||||||||| |||| |||||||
Sbjct: 371 atgcgtggtgatttggaaagggccaatgaaattctacc 408
>gnl|LJGI|TC62201 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 690
Score = 280 bits (141), Expect = 4e-74
Identities = 228/257 (88%)
Strand = Plus / Plus
Query: 2161 gagattgtggcaatttggaggaaagatctcaacaaggttaatcctaaagctgctgaatct 2220
||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 3 gagatagtggcaatttggagaaaagatctcaacaaggttaatccaaaggctgctgaatca 62
Query: 2221 ttggctgatcctgaggaatatccaaatttgtttgaagactggcaagtcgcccttgctgtt 2280
||||||||||||||||| ||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 63 ttggctgatcctgaggagtatcctaatttgttcgaagattggcaagttgctcttgctgtt 122
Query: 2281 gaatctaaagctatagaaacaaggaatgttgaccctcctgcagagcagtacatcagccat 2340
||||||||| || ||||||||||| |||| |||||||||| ||| |||| ||| ||||
Sbjct: 123 gaatctaaatctgtagaaacaaggggtgtttaccctcctgcggaggagtatgtcaaccat 182
Query: 2341 gctgacaaatcacatgtaacccttgttgaagctttcagaaacatgcagattgaagaagag 2400
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 183 gctggtaaatcacatgtaaccctagttgaagctttcagaaacatgcagattgaaggggaa 242
Query: 2401 gagcctcttgagaatgg 2417
| ||||||||||||||
Sbjct: 243 caacctcttgagaatgg 259
>gnl|LJGI|GO025122 similar to UniRef100_Q9C827 Cluster: Coatomer subunit beta'-2; n=1;
Arabidopsis thaliana|Rep: Coatomer subunit beta'-2 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 788
Score = 165 bits (83), Expect = 2e-39
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 2376 cagaaacatgcagattgaagaagaggagcctcttgagaatggtgactcgaattatgagca 2435
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagaaacatgcagattgaggaagaggagcctcttgagaatggtgactcgaattatgagca 61
Query: 2436 aactaaacaagatgaagaggactacac 2462
|||||||||||||||||||||||||||
Sbjct: 62 aactaaacaagatgaagaggactacac 88
Score = 95.6 bits (48), Expect = 1e-18
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 2528 gccaagaggaggccgttgtagtggatgcgaaatcaacagatggtgcagtact 2579
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 154 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtact 205
>gnl|LJGI|AV781170 homologue to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 477
Score = 147 bits (74), Expect = 4e-34
Identities = 115/126 (91%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 1 atggccaaatcttttgaggt-tactgagttaccagttagatcagccaag-tttgttgcac 58
|||||||| ||||||||||| |||||||||||||||||| ||||||||| ||| ||||||
Sbjct: 352 atggccaagtcttttgaggtgtactgagttaccagttaggtcagccaaggtttattgcac 411
Query: 59 gcaaacagtgggttgttgctggagcagatgatatgttcatccgtgtctataattacaaca 118
|||| ||||||||||| |||||||||||||||||||| || ||||| ||||||||||| |
Sbjct: 412 gcaagcagtgggttgtggctggagcagatgatatgtttattcgtgtatataattacaaga 471
Query: 119 caatgg 124
||||||
Sbjct: 472 caatgg 477
>gnl|LJGI|BP056159 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (5%)
Length = 561
Score = 95.6 bits (48), Expect = 1e-18
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 2528 gccaagaggaggccgttgtagtggatgcgaaatcaacagatggtgcagtact 2579
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 479 gccaagaggaggccgttgtagtggatgcggaatcaacagatggtgcagtact 428
>gnl|LJGI|BP065229
Length = 489
Score = 77.8 bits (39), Expect = 3e-13
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 2533 gaggaggccgttgtagtggatgcgaaatcaacagatggtgcagtactagccaatgtgctt 2592
|||||||||||||||||||||||| |||| || |||||||| ||||| | | ||||||||
Sbjct: 471 gaggaggccgttgtagtggatgcggaatccaccgatggtgccgtactcgtccatgtgctt 412
Query: 2593 gcaccacgtcactag 2607
|| || |||||||||
Sbjct: 411 gccccccgtcactag 397
>gnl|LJGI|TC77037 similar to UniRef100_A7P7E9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (5%)
Length = 568
Score = 73.8 bits (37), Expect = 5e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 2539 gccgttgtagtggatgcgaaatcaacagatggtgcagtact 2579
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 gccgttgtagtggatgcggaatcaacagatggtgcagtact 41