Miyakogusa Predicted Gene
- Lj3g3v0139480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0139480.1 tr|A9TSB0|A9TSB0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96490
,38.96,4e-18,seg,NULL; OS01G0617700 PROTEIN,NULL; CENTROMERE PROTEIN
C,NULL,CUFF.40318.1
(2103 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026236 similar to UniRef100_Q66LI1 Cluster: CENP-C; n... 450 e-125
gnl|LJGI|TC73232 weakly similar to UniRef100_Q66LI1 Cluster: CEN... 371 e-101
>gnl|LJGI|GO026236 similar to UniRef100_Q66LI1 Cluster: CENP-C; n=1; Medicago
truncatula|Rep: CENP-C - Medicago truncatula (Barrel
medic), partial (11%)
Length = 227
Score = 450 bits (227), Expect = e-125
Identities = 227/227 (100%)
Strand = Plus / Plus
Query: 713 tggaaaatgaagtaactgattcatcagctactgaggggaacaagatttgtgaaattttgg 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaaaatgaagtaactgattcatcagctactgaggggaacaagatttgtgaaattttgg 60
Query: 773 atggattgctgcgttgcaattctgaagatctagagggggatggagcaatggatcttttgc 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggattgctgcgttgcaattctgaagatctagagggggatggagcaatggatcttttgc 120
Query: 833 aggagaggctacaaattaaacccgttgttttagagaaagtatctgttccagacttcccag 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggagaggctacaaattaaacccgttgttttagagaaagtatctgttccagacttcccag 180
Query: 893 ataaccaaccgattgatctgaaatctttacgaggaagcttatcaaag 939
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataaccaaccgattgatctgaaatctttacgaggaagcttatcaaag 227
>gnl|LJGI|TC73232 weakly similar to UniRef100_Q66LI1 Cluster: CENP-C; n=1; Medicago
truncatula|Rep: CENP-C - Medicago truncatula (Barrel
medic), partial (15%)
Length = 573
Score = 371 bits (187), Expect = e-101
Identities = 187/187 (100%)
Strand = Plus / Plus
Query: 293 gtcaggattttcctcggaaacggagaccgggcttgggtctcaagcgtgcgcgattctctt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtcaggattttcctcggaaacggagaccgggcttgggtctcaagcgtgcgcgattctctt 446
Query: 353 tgaagccaagcacaagtgtttctcttgagagtttgctgccaaatctggacattgaaaacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgaagccaagcacaagtgtttctcttgagagtttgctgccaaatctggacattgaaaacc 506
Query: 413 tgaaagatccggtggaattcttcaaggctcacgagcggatggaaaatgcgagaagagaaa 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgaaagatccggtggaattcttcaaggctcacgagcggatggaaaatgcgagaagagaaa 566
Query: 473 tacagaa 479
|||||||
Sbjct: 567 tacagaa 573
Score = 242 bits (122), Expect = 7e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 118 gtcgccgacgacctcgacgccatccacaaccacctccgatccatggcgttgcgaagtccc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gtcgccgacgacctcgacgccatccacaaccacctccgatccatggcgttgcgaagtccc 277
Query: 178 gcgaaacttgtggagcagacgaaagccatactcgaggagaatccaggactgttcaactct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gcgaaacttgtggagcagacgaaagccatactcgaggagaatccaggactgttcaactct 337
Query: 238 ca 239
||
Sbjct: 338 ca 339
Score = 95.6 bits (48), Expect = 1e-18
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggagaagaacaaaattgacgaaaccgtagcagaacaacaacaacca 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atggagaagaacaaaattgacgaaaccgtagcagaacaacaacaacca 148