Miyakogusa Predicted Gene
- Lj3g3v0139420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0139420.1 Non Chatacterized Hit- tr|I1M5N3|I1M5N3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53679
PE,84.69,0,ZF_RING_2,Zinc finger, RING-type; zf-RING_2,Zinc finger,
RING-type; RING/U-box,NULL; no description,,CUFF.40320.1
(1251 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77682 similar to UniRef100_A7P7H0 Cluster: Chromosome... 1556 0.0
gnl|LJGI|TC75027 similar to UniRef100_A7P5G9 Cluster: Chromosome... 103 3e-21
gnl|LJGI|TC70108 similar to UniRef100_A7P5G9 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC77682 similar to UniRef100_A7P7H0 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (50%)
Length = 901
Score = 1556 bits (785), Expect = 0.0
Identities = 802/805 (99%), Gaps = 2/805 (0%)
Strand = Plus / Plus
Query: 281 gtgaggggtacggtcatcaaagaaggagtccattaaattctggactgtggatttctgttg 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgaggggtacggtcatcaaagaaggagtccattaaattctggactgtggatttctgttg 61
Query: 341 agctttttgtcactgtgagtcagatcatagcatctattgtggttttgtcattgtccagga 400
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 62 agctttt-gtcactgtgagtcagatcatagcatctattgtggttt-gtcattgtccagga 119
Query: 401 atgaaaatccccaagccccattgtttgcttgggttgtgggttatgcagctggttgtgttg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgaaaatccccaagccccattgtttgcttgggttgtgggttatgcagctggttgtgttg 179
Query: 461 ccacacttcctattctattttggcgttttcgaaaccgttatcaaagcactgaacaacata 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccacacttcctattctattttggcgttttcgaaaccgttatcaaagcactgaacaacata 239
Query: 521 cctctcagccatctcaaggatcttctggaagcaatcctccggagcgtacttatacttcca 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cctctcagccatctcaaggatcttctggaagcaatcctccggagcgtacttatacttcca 299
Query: 581 tctatgtttctcatgaggagaatggtcatgctgcacaatcagcagcaagaaacactttaa 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tctatgtttctcatgaggagaatggtcatgctgcacaatcagcagcaagaaacactttaa 359
Query: 641 ttcccagagcctttacctctaggctcaatggaatagtagaccatttcaagatggccttgg 700
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttcccagaggctttacctctaggctcaatggaatagtagaccatttcaagatggccttgg 419
Query: 701 attgcttctttgcagtttggtttgttgtaggaaatgtttggatctttggaggtcacactt 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 attgcttctttgcagtttggtttgttgtaggaaatgtttggatctttggaggtcacactt 479
Query: 761 ctccttctgatgctccccaattatataggttatgtattgtgtttcttacctttagctgta 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctccttctgatgctccccaattatataggttatgtattgtgtttcttacctttagctgta 539
Query: 821 tcggatatgctatgccatttatactgtgtgcaactatttgctgctgccttccttgcataa 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcggatatgctatgccatttatactgtgtgcaactatttgctgctgccttccttgcataa 599
Query: 881 tttctgttttgggcattcgggaggatttttctcaaaatagaggagcaactgtagaatcta 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tttctgttttgggcattcgggaggatttttctcaaaatagaggagcaactgtagaatcta 659
Query: 941 ttaatgctcttccaatctacaagttcaaattgaagaactatcaaaatgttgatgatcatg 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttaatgctcttccaatctacaagttcaaattgaagaactatcaaaatgttgatgatcatg 719
Query: 1001 ataacatcaatgcagctatagatgaaggtgggattttagctgccgggacagaaaaggagc 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ataacatcaatgcagctatagatgaaggtgggattttagctgccgggacagaaaaggagc 779
Query: 1061 ggatgatttccggagatgatgctgt 1085
|||||||||||||||||||||||||
Sbjct: 780 ggatgatttccggagatgatgctgt 804
>gnl|LJGI|TC75027 similar to UniRef100_A7P5G9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 802
Score = 103 bits (52), Expect = 3e-21
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 700 gattgcttctttgcagtttggtttgttgtaggaaatgtttggatctttggaggtcacact 759
|||||||| |||||| | ||||||||||| |||||||| ||||||||||| || || |
Sbjct: 255 gattgcttttttgcaatatggtttgttgttggaaatgtatggatctttgggggacattca 314
Query: 760 tctccttctgatgctccccaattatataggttatgtattgtgtttcttacctttagctgt 819
||| || ||| ||||| | | || ||||||||| | ||||||||||| || ||||||
Sbjct: 315 tctgctagtgaagctccaaacatgtacaggttatgtgtagtgtttcttactttaagctgt 374
Query: 820 atcggatatgctatgccatttatactgtgtgcaactatttgctgctgccttccttg 875
||||| |||||||||||||| || || |||||||| || |||||||| ||||||||
Sbjct: 375 atcggttatgctatgccattcattctatgtgcaacaatctgctgctgtcttccttg 430
>gnl|LJGI|TC70108 similar to UniRef100_A7P5G9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (40%)
Length = 1110
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1168 gttgacaaatggttaaagataaatgcatcctgccctctttg 1208
|||||||| ||||||||||||||||||| |||||||||||
Sbjct: 416 gttgacaagtggttaaagataaatgcattatgccctctttg 456
Score = 52.0 bits (26), Expect = 9e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 787 aggttatgtattgtgtttcttacctttagctgtatcggatatgctatgccatttatactg 846
|||||||| || ||||||||| | ||||||||||| || ||||| ||||| || || ||
Sbjct: 43 aggttatgcatagtgtttcttgcatttagctgtattggttatgcaatgcccttcattctc 102
Query: 847 tgtgcaactatttgctgctgccttccttgcataatttc 884
||| |||| || ||||| || || ||||| ||||||||
Sbjct: 103 tgttcaacaatctgctgttgtctcccttgtataatttc 140