Miyakogusa Predicted Gene
- Lj3g3v0139410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0139410.1 tr|G7JHV9|G7JHV9_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_4g118380 PE=4 SV=1,66.67,0.00000002,A Receptor for
Ubiquitination Targets,F-box domain, cyclin-like; coiled-coil,NULL;
FAMILY NOT NAMED,,gene.g44901.t1.1
(1201 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63103 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 92 1e-17
gnl|LJGI|FS324583 weakly similar to UniRef100_Q1KQ06 Cluster: S ... 90 4e-17
gnl|LJGI|TC78685 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 82 9e-15
gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 76 6e-13
gnl|LJGI|BW633228 72 9e-12
gnl|LJGI|FS334099 weakly similar to UniRef100_A7Q9Q9 Cluster: Ch... 72 9e-12
gnl|LJGI|FS333874 similar to UniRef100_A7Q9Q9 Cluster: Chromosom... 68 1e-10
gnl|LJGI|FS327402 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 66 5e-10
gnl|LJGI|TC58044 weakly similar to UniRef100_A4UV34 Cluster: F-b... 66 5e-10
gnl|LJGI|TC73974 weakly similar to UniRef100_A7Q9Q0 Cluster: Chr... 64 2e-09
gnl|LJGI|BP076687 similar to UniRef100_A7Q9Q9 Cluster: Chromosom... 62 9e-09
gnl|LJGI|TC71340 UniRef100_Q8VDV5 Cluster: Dmxl1 protein; n=1; M... 62 9e-09
gnl|LJGI|GO023363 weakly similar to UniRef100_A7Q9Q0 Cluster: Ch... 60 3e-08
gnl|LJGI|GO031580 weakly similar to UniRef100_A7PQD5 Cluster: Ch... 60 3e-08
gnl|LJGI|BW633278 similar to UniRef100_A7Q9Q9 Cluster: Chromosom... 60 3e-08
gnl|LJGI|DC599428 weakly similar to UniRef100_A7Q9Q0 Cluster: Ch... 56 5e-07
gnl|LJGI|TC80454 similar to UniRef100_Q2HV76 Cluster: F-box prot... 56 5e-07
gnl|LJGI|TC77017 similar to UniRef100_Q2HV76 Cluster: F-box prot... 56 5e-07
gnl|LJGI|GO007342 similar to UniRef100_A7Q9Q9 Cluster: Chromosom... 52 8e-06
>gnl|LJGI|TC63103 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 817
Score = 91.7 bits (46), Expect = 1e-17
Identities = 100/118 (84%)
Strand = Plus / Plus
Query: 44 tgttgaggttgccggttagatctcttgtgcgtttcaaatgcgtgtgtaagtcatggctct 103
|||| ||||| ||||| |||||||| | |||||||||| ||||| || |||||||| |
Sbjct: 275 tgttaaggttaccggtgagatctctcctccgtttcaaatcagtgtgcaaatcatggctgt 334
Query: 104 ccctaatatccgatcctgaattcggtaaatctcattttgacctagctgctgcacccac 161
| || || || ||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 335 ctctgatttctgatccccaattcggtaaatcccattttgacctagctgctgcacccac 392
>gnl|LJGI|FS324583 weakly similar to UniRef100_Q1KQ06 Cluster: S locus F-box-S2C
protein; n=1; Antirrhinum hispanicum|Rep: S locus
F-box-S2C protein - Antirrhinum hispanicum (Snapdragon),
partial (6%)
Length = 776
Score = 89.7 bits (45), Expect = 4e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 49 aggttgccggttagatctcttgtgcgtttcaaatgcgtgtgtaagtcatggctctcccta 108
||||| ||||| |||||||| | |||||||||| ||||||||| | ||||||| ||
Sbjct: 280 aggttaccggtgagatctctgcttcgtttcaaattggtgtgtaagccctggctctttctc 339
Query: 109 atatccgatcctgaattcggtaaatctcattttgacctagctgctgcacccac 161
|| |||||||| |||||||||||||||| | |||||||||||||||||||||
Sbjct: 340 atttccgatccccaattcggtaaatctcactatgacctagctgctgcacccac 392
>gnl|LJGI|TC78685 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 506
Score = 81.8 bits (41), Expect = 9e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 112 tccgatcctgaattcggtaaatctcattttgacctagctgctgcacccactca 164
|||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 145 tccgatcccaaattcggtaaatcccattttgacctagctgctgcacccactca 197
>gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 681
Score = 75.8 bits (38), Expect = 6e-13
Identities = 104/126 (82%)
Strand = Plus / Plus
Query: 50 ggttgccggttagatctcttgtgcgtttcaaatgcgtgtgtaagtcatggctctccctaa 109
|||| ||||| |||||||| |||| ||||||||||| ||||| |||||| | | || |
Sbjct: 82 ggttaccggtgagatctctactgcgcttcaaatgcgtttgtaaatcatggttttatctca 141
Query: 110 tatccgatcctgaattcggtaaatctcattttgacctagctgctgcacccactcatcgcc 169
| || ||||| |||| | |||||| |||||||||||| |||||||||||||||||| |
Sbjct: 142 tttctgatccccaatttgctaaatcccattttgacctaaatgctgcacccactcatcgtc 201
Query: 170 ttcttc 175
||||||
Sbjct: 202 ttcttc 207
Score = 52.0 bits (26), Expect = 8e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 518 atggttttgggtatgatgaatcaactgatgactacttgctagttcttata 567
|||||||||||||||| | ||||| |||||||| || ||||||||||||
Sbjct: 436 atggttttgggtatgacaactcaaccgatgactattttctagttcttata 485
>gnl|LJGI|BW633228
Length = 428
Score = 71.9 bits (36), Expect = 9e-12
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 38 agattatgttgaggttgccggttagatctcttgtgcgtttcaaatgcgtgtgtaagtcat 97
||||| || ||||| | |||||| ||||||| | || ||||||| ||||| || ||||
Sbjct: 132 agattctggtgaggcttccggttcgatctctgctccgcttcaaatcggtgtgcaaatcat 191
Query: 98 ggctctccctaatatccgatcctgaattcggtaaatctcattttgacctagctgctgcac 157
||| || || || |||||||| ||||||||||||| |||||||||||||||||| |||
Sbjct: 192 ggcggtctctgatttccgatcccaaattcggtaaatcccattttgacctagctgcttcac 251
Query: 158 ccac 161
||||
Sbjct: 252 ccac 255
>gnl|LJGI|FS334099 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 801
Score = 71.9 bits (36), Expect = 9e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 518 atggttttgggtatgatgaatcaactgatgactacttgctagtt 561
||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 665 atggtattgggtatgatgaatcaactgatgactacttgttagtt 708
>gnl|LJGI|FS333874 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 759
Score = 67.9 bits (34), Expect = 1e-10
Identities = 94/114 (82%)
Strand = Plus / Plus
Query: 44 tgttgaggttgccggttagatctcttgtgcgtttcaaatgcgtgtgtaagtcatggctct 103
|||||||||| ||||| |||||||| | |||||||||| |||| |||| | |||||||
Sbjct: 236 tgttgaggttaccggtgagatctctgcttcgtttcaaatcggtgtctaagccctggctct 295
Query: 104 ccctaatatccgatcctgaattcggtaaatctcattttgacctagctgctgcac 157
|| || |||||||| ||||||| ||||||| | |||||||||||||||||
Sbjct: 296 ttctcatttccgatccccaattcggcaaatctcgctatgacctagctgctgcac 349
>gnl|LJGI|FS327402 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 404
Score = 65.9 bits (33), Expect = 5e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 73 cgtttcaaatgcgtgtgtaagtcatggctctccctaatatccgatcctgaattcggtaaa 132
|||||||||| ||| || || ||||||||||| || | |||||||| |||||||| ||
Sbjct: 122 cgtttcaaatccgtctgcaaatcatggctctctctggtttccgatccccaattcggtgaa 181
Query: 133 tctcattttgacctagctgct 153
|| ||||||||||||||||||
Sbjct: 182 tcccattttgacctagctgct 202
>gnl|LJGI|TC58044 weakly similar to UniRef100_A4UV34 Cluster: F-box domain-containing
protein; n=2; Solanum|Rep: F-box domain-containing
protein - Solanum tuberosum (Potato), partial (15%)
Length = 821
Score = 65.9 bits (33), Expect = 5e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 513 tctgcatggttttgggtatgatgaatcaactgatgactacttgctagtt 561
|||| ||||| ||||||||||||||||||| |||||||||||| |||||
Sbjct: 588 tctgaatggtattgggtatgatgaatcaaccgatgactacttgttagtt 636
>gnl|LJGI|TC73974 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 783
Score = 63.9 bits (32), Expect = 2e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 112 tccgatcctgaattcggtaaatctcattttgacctagctgctgcaccc 159
|||||||| ||||||||||||| |||||||||||||||||| |||||
Sbjct: 227 tccgatccccaattcggtaaatcccattttgacctagctgcttcaccc 274
>gnl|LJGI|BP076687 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 389
Score = 61.9 bits (31), Expect = 9e-09
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 47 tgaggttgccggttagatctcttgtgcgtttcaaatgcgtgtgtaagtcatggctctccc 106
||||||| || ||| ||||||| | |||||||||| ||| || || |||||| | || |
Sbjct: 350 tgaggttaccagttcgatctctactccgtttcaaatccgtctgcaaatcatggttgtctc 291
Query: 107 taatatccgatcctgaattcggtaaatctcattttgacctagctgctgcacccac 161
| || || ||||| |||||||||||||||| | ||||||||||||| |||||||
Sbjct: 290 tcatttctgatcccaaattcggtaaatctcactatgacctagctgcttcacccac 236
>gnl|LJGI|TC71340 UniRef100_Q8VDV5 Cluster: Dmxl1 protein; n=1; Mus musculus|Rep: Dmxl1
protein - Mus musculus (Mouse), partial (29%)
Length = 530
Score = 61.9 bits (31), Expect = 9e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1167 ttatatctatagagagagtttgctaccactccctt 1201
|||||| ||||||||||||||||||||||||||||
Sbjct: 15 ttatatgtatagagagagtttgctaccactccctt 49
>gnl|LJGI|GO023363 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 622
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 tccgatcctgaattcggtaaatctcattttgacctagctgctgcacccac 161
|||||||| ||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 191 tccgatccccaattctgcaaatcccattttgacctagctgctgcacccac 240
>gnl|LJGI|GO031580 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 654
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 tccgatcctgaattcggtaaatctcattttgacctagctgctgcacccac 161
|||||||| |||| ||||||||||| | |||||||||||||||||||||
Sbjct: 179 tccgatcccaaatttggtaaatctcactatgacctagctgctgcacccac 228
>gnl|LJGI|BW633278 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 466
Score = 60.0 bits (30), Expect = 3e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 44 tgttgaggttgccggttagatctcttgtgcgtttcaaatgcgtgtgtaagtcatggct 101
||||||||||||| || | |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 102 tgttgaggttgccagtgaagtctcttgtacgtttcaagtgcgtttgtaagtcatggct 159
>gnl|LJGI|DC599428 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 574
Score = 56.0 bits (28), Expect = 5e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 519 tggttttgggtatgatgaatcaactgatgactacttgctagttcttat 566
|||||||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 482 tggttttgggtatggcaaatcaacagatgactacttgcttgttcttat 529
>gnl|LJGI|TC80454 similar to UniRef100_Q2HV76 Cluster: F-box protein interaction
domain; Galactose oxidase, central; n=1; Medicago
truncatula|Rep: F-box protein interaction domain;
Galactose oxidase, central - Medicago truncatula (Barrel
medic), partial (13%)
Length = 1607
Score = 56.0 bits (28), Expect = 5e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 512 ttctgcatggttttgggtatgatgaatcaactgatgactacttg 555
||||| ||||| |||||||||||||||||| |||||| ||||||
Sbjct: 509 ttctgtatggtattgggtatgatgaatcaaatgatgattacttg 552
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 718 gggttgttcttgaatcagtctcttcattggttggtt 753
||||||||||||||| || |||||||||||||||||
Sbjct: 691 gggttgttcttgaatgaggctcttcattggttggtt 726
>gnl|LJGI|TC77017 similar to UniRef100_Q2HV76 Cluster: F-box protein interaction
domain; Galactose oxidase, central; n=1; Medicago
truncatula|Rep: F-box protein interaction domain;
Galactose oxidase, central - Medicago truncatula (Barrel
medic), partial (8%)
Length = 1280
Score = 56.0 bits (28), Expect = 5e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 518 atggttttgggtatgatgaatcaactgatgactacttgctagtt 561
||||| |||||||||||||||||| |||||| |||||| |||||
Sbjct: 532 atggtattgggtatgatgaatcaaatgatgattacttgttagtt 575
>gnl|LJGI|GO007342 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 726
Score = 52.0 bits (26), Expect = 8e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 524 ttgggtatgatgaatcaactgatgactacttgctagtt 561
||||||||||| ||||||| |||||||||||| |||||
Sbjct: 412 ttgggtatgatcaatcaacggatgactacttgttagtt 449