Miyakogusa Predicted Gene
- Lj3g3v0129240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0129240.1 Non Chatacterized Hit- tr|D8LG59|D8LG59_ECTSI
Putative uncharacterized protein OS=Ectocarpus silicul,32.76,1e-18,no
description,NULL; seg,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL,CUFF.40308.1
(840 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75317 similar to UniRef100_A7P7I0 Cluster: Chromosome... 240 1e-62
gnl|LJGI|BP055698 homologue to UniRef100_A7P7I0 Cluster: Chromos... 107 1e-22
>gnl|LJGI|TC75317 similar to UniRef100_A7P7I0 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 762
Score = 240 bits (121), Expect = 1e-62
Identities = 351/425 (82%), Gaps = 2/425 (0%)
Strand = Plus / Plus
Query: 278 ctgcccaagtttcctctgtgcaagacctctttgaattcatttgctcaggccctttgcttg 337
|||| ||||||||||||||| | || || | |||||| ||||||||||| ||||||||
Sbjct: 336 ctgctcaagtttcctctgtggaggatctttatgaatttatttgctcaggacctttgctaa 395
Query: 338 acaaacttggtctgacaagagagaaggtggccgagtccatcgataactggattacatatg 397
||||| ||||| ||||| |||||||||||| |||||||| ||||| ||| | |||| |
Sbjct: 396 acaaaattggtttgacacaagagaaggtggcagagtccatagataagtggctatcatacg 455
Query: 398 ggcggcgcctgtgccaaattttccagcttaatgaattgttcctgacagaacctcaaaaag 457
| ||| || |||||| | || ||||||||||||||||| | |||| ||||||||
Sbjct: 456 gtcggtatctatgccaattgtttcagcttaatgaattgtttttaacagtgcctcaaaaga 515
Query: 458 ctaggctgtatcactactatgtaccggtctttctctggtgtgaagatcagatcgctcagc 517
| || | |||||||||||| |||| ||||| ||||||||||| |||||| | | |||||
Sbjct: 516 ttcgggtctatcactactatataccagtcttcctctggtgtgaggatcaggttgttcagc 575
Query: 518 atcaatccaagttcaaagatgaaa-aagatatacctcctttagtgattggatttagtgca 576
| ||| ||| | |||||| ||| |||||| ||| |||||||||||||||||||||||
Sbjct: 576 accaagccatgg-caaagaataaagaagatacaccccctttagtgattggatttagtgct 634
Query: 577 cctcaaggatgtggaaagactaccgttgtctttgctcttgactttcttttcagaatgaat 636
|| ||||| ||||||||||| ||| |||||| ||||||||| | ||||||||| | | |
Sbjct: 635 ccccaaggctgtggaaagacaacccttgtctatgctcttgattatcttttcagggtaact 694
Query: 637 ggaaggaagtctgcaacaatatctatagatgatttttatttgacagctgaaggtcagaat 696
|| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |
Sbjct: 695 gggaggaagtcagcaacaatatccatagatgatttttatttgacagcagaaggtcagagt 754
Query: 697 aaact 701
|||||
Sbjct: 755 aaact 759
>gnl|LJGI|BP055698 homologue to UniRef100_A7P7I0 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 178
Score = 107 bits (54), Expect = 1e-22
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 640 aggaagtctgcaacaatatctatagatgatttttatttgacagctgaaggtcag 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggaagtctgcaacaatatctatagatgatttttatttgacagctgaaggtcag 55