Miyakogusa Predicted Gene

Lj3g3v0126190.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0126190.1 CUFF.40303.1
         (486 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60016 similar to UniRef100_A7QKV0 Cluster: Chromosome...   896   0.0  

>gnl|LJGI|TC60016 similar to UniRef100_A7QKV0 Cluster: Chromosome chr8 scaffold_115,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_115, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 737

 Score =  896 bits (452), Expect = 0.0
 Identities = 476/485 (98%), Gaps = 1/485 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcggattcttcccgaaacgtcgacgtggaggagctgatctcctacagcgacgacctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggcggattcttcccgaaacgtcgacgtggaggagctgatctcctacagcgacgacctc 119

                                                                       
Query: 61  ctgaaggtgttgcgagacccgcgtgacctcaacggcctcttccactgtctccaacactcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctgaaggtgttgcgagacccgcgtgacctcaacggcctcttccactgtctccaacactcc 179

                                                                       
Query: 121 ctctccctttcttccacatgcgactccgacctcaacgacgctcgctccttgctccaagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctctccctttcttccacatgcgactccgacctcaacgacgctcgctccttgctccaagat 239

                                                                       
Query: 181 tatcagnnnnnnn-ttgatgcatacaagcgaaagatagaagaagctggatctgagacggt 239
           ||||||        ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 240 tatcagaaaaaaaattgatgcatacaagcgaaagatagaagaagctggatctgagactgt 299

                                                                       
Query: 240 tgctgatgcagaactggatcttctgcagagagaattggaggaagaacttgaaaaggaacg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgctgatgcagaactggatcttctgcagagagaattggaggaagaacttgaaaaggaacg 359

                                                                       
Query: 300 cttgttgaaagaggagtttagagccattagagatgagtttaatgatctagaacagcaacg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cttgttgaaagaggagtttagagccattagagatgagtttaatgatctagaacagcaacg 419

                                                                       
Query: 360 aatgtccatccaagagcaaaagaaagctttacataaaattgagcaagataagctgaggac 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aatgtccatccaagagcaaaagaaagctttacataaaattgagcaagataagctgaggac 479

                                                                       
Query: 420 acaaatgacactttcgatgtatgcttctgtcacaaatattgtgccaaacttggatgatca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acaaatgacactttcgatgtatgcttctgtcacaaatattgtgccaaacttggatgatca 539

                
Query: 480 atcca 484
           |||||
Sbjct: 540 atcca 544