Miyakogusa Predicted Gene

Lj3g3v0126180.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0126180.1 Non Chatacterized Hit- tr|G7IMF6|G7IMF6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,71.81,0,seg,NULL; coiled-coil,NULL,CUFF.40302.1
         (2205 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS349602 weakly similar to UniRef100_A7P7N3 Cluster: Ch...   101   2e-20

>gnl|LJGI|FS349602 weakly similar to UniRef100_A7P7N3 Cluster: Chromosome chr9
            scaffold_7, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 618

 Score =  101 bits (51), Expect = 2e-20
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                        
Query: 979  actattcaagacctggaattggcgctcataaaacgtaggaggaaggcagaaaaatgcaga 1038
            |||||||||||||||||||| | | ||||||| |||||||||||||  |||||||||| |
Sbjct: 275  actattcaagacctggaattagtgttcataaagcgtaggaggaaggttgaaaaatgcaca 216

                                                   
Query: 1039 cgattagcggaggctcaatcttcttacagaaccatgctg 1077
            ||||||| ||||||||| |||| |||||| || ||||||
Sbjct: 215  cgattagtggaggctcattctttttacaggacaatgctg 177