Miyakogusa Predicted Gene
- Lj3g3v0126170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0126170.1 Non Chatacterized Hit- tr|I1M5Q3|I1M5Q3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23303
PE,78.06,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL; NPH3,NPH3,CUFF.40301.1
(1287 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76842 similar to UniRef100_A7P7N5 Cluster: Chromosome... 1697 0.0
gnl|LJGI|TC61273 similar to UniRef100_A7P7N5 Cluster: Chromosome... 258 8e-68
gnl|LJGI|BI420384 similar to UniRef100_A7P7N5 Cluster: Chromosom... 244 1e-63
gnl|LJGI|TC69404 similar to UniRef100_A7P7N5 Cluster: Chromosome... 224 1e-57
gnl|LJGI|GO021517 64 2e-09
gnl|LJGI|BP038348 weakly similar to UniRef100_A7P7N5 Cluster: Ch... 58 1e-07
>gnl|LJGI|TC76842 similar to UniRef100_A7P7N5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (38%)
Length = 1006
Score = 1697 bits (856), Expect = 0.0
Identities = 859/860 (99%)
Strand = Plus / Plus
Query: 428 tatcgtggcagctagaccaggctgcaatcaatgagctcatgattccctctttcagtcaca 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tatcgtggcagctagaccaggctgcaatcaatgagctcatgattccctctttcagtcaca 61
Query: 488 cttgtgggacactccttgatgttgagcttgtcataaggttggtgaagagatttgtgagct 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cttgtgggacactccttgatgttgagcttgtcataaggttggtgaagagatttgtgagct 121
Query: 548 tggaccatgaaggagctaaaactggtgctgctttggttaaggtggctaagcttgttgatt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggaccatgaaggagctaaaactggtgctgctttggttaaggtggctaagcttgttgatt 181
Query: 608 gctaccttgctgaggctgctatggatgccaatttgagcttatctgagtttgttgcacttg 667
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gctacctttctgaggctgctatggatgccaatttgagcttatctgagtttgttgcacttg 241
Query: 668 ctggagctcttccaagccatgcaagagctactgatgatggattgtatagagccattgaca 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctggagctcttccaagccatgcaagagctactgatgatggattgtatagagccattgaca 301
Query: 728 cttatctaaaagcacatccaagcgtgtcaaagcaagaaaggaaaggactatgtaagctga 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cttatctaaaagcacatccaagcgtgtcaaagcaagaaaggaaaggactatgtaagctga 361
Query: 788 ttgatagccggaaattgacgccagaggcctcacttcatgcagctcaaaatgaaaggtttc 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgatagccggaaattgacgccagaggcctcacttcatgcagctcaaaatgaaaggtttc 421
Query: 848 cagtaagagctgtcattcaggtgctcttctctgaacaaaccaaactcaatcgccacatgg 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cagtaagagctgtcattcaggtgctcttctctgaacaaaccaaactcaatcgccacatgg 481
Query: 908 attggagtagctctttcagcagcttgaggagcccgaatggcaggttcgaccagccgacac 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 attggagtagctctttcagcagcttgaggagcccgaatggcaggttcgaccagccgacac 541
Query: 968 ggtgtctttcaaagcgtgaaatgaatgttcagcagatggagataaagaagctgaaggaag 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggtgtctttcaaagcgtgaaatgaatgttcagcagatggagataaagaagctgaaggaag 601
Query: 1028 aggtttacaggctgcaaagccagtgcaatgccatgcaaatgcagatggagaggatgtcag 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aggtttacaggctgcaaagccagtgcaatgccatgcaaatgcagatggagaggatgtcag 661
Query: 1088 agaagaagagtggaagaagcttcttcaaatggaagaagcttgggatggcagcgtttagta 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agaagaagagtggaagaagcttcttcaaatggaagaagcttgggatggcagcgtttagta 721
Query: 1148 aaggcacgggagaggtggaggatgaccaggaagagggtgaaagggaagttgggtttggaa 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aaggcacgggagaggtggaggatgaccaggaagagggtgaaagggaagttgggtttggaa 781
Query: 1208 ggcaaacgcctatggacatgaaatctgggctggtcaaatgtaggactccccacaagttga 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ggcaaacgcctatggacatgaaatctgggctggtcaaatgtaggactccccacaagttga 841
Query: 1268 ggaaatctatgtcctgaaat 1287
||||||||||||||||||||
Sbjct: 842 ggaaatctatgtcctgaaat 861
>gnl|LJGI|TC61273 similar to UniRef100_A7P7N5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 778
Score = 258 bits (130), Expect = 8e-68
Identities = 286/338 (84%)
Strand = Plus / Plus
Query: 402 ttaccggcaagagctcgagaagcgcatatcgtggcagctagaccaggctgcaatcaatga 461
|||| |||| ||||| ||||||||||| ||||||||| ||||||||||| | | || ||
Sbjct: 24 ttacaggcaggagctggagaagcgcatttcgtggcagttagaccaggcttcgttgaagga 83
Query: 462 gctcatgattccctctttcagtcacacttgtgggacactccttgatgttgagcttgtcat 521
||| |||| || ||||||||||||||||||||||| || | |||||||| | || ||
Sbjct: 84 gcttgtgataccttctttcagtcacacttgtgggactctgttggatgttgaattggtgat 143
Query: 522 aaggttggtgaagagatttgtgagcttggaccatgaaggagctaaaactggtgctgcttt 581
||| |||||||||| || ||||||||||| |||||| ||||| | |||||||||||
Sbjct: 144 taggctggtgaagaggttcgtgagcttggatagtgaaggggctaagagcggtgctgcttt 203
Query: 582 ggttaaggtggctaagcttgttgattgctaccttgctgaggctgctatggatgccaattt 641
| |||| ||||| ||| | ||||||| || |||||||| ||||||||||||||||||||
Sbjct: 204 gcttaaagtggcgaagttggttgattcgtatcttgctgaagctgctatggatgccaattt 263
Query: 642 gagcttatctgagtttgttgcacttgctggagctcttccaagccatgcaagagctactga 701
|||||| |||||||||||| | ||||| || ||||||||||| ||||||||||| | ||
Sbjct: 264 gagcttgtctgagtttgttactcttgcgggtgctcttccaagtcatgcaagagcaataga 323
Query: 702 tgatggattgtatagagccattgacacttatctaaaag 739
|||||||||||| |||||||||||||||||||||||||
Sbjct: 324 tgatggattgtacagagccattgacacttatctaaaag 361
>gnl|LJGI|BI420384 similar to UniRef100_A7P7N5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 319
Score = 244 bits (123), Expect = 1e-63
Identities = 237/275 (86%)
Strand = Plus / Plus
Query: 274 tcatggatgaagaagaggttcttcgtggaaaccttggttggtgttctgcctcctgagaag 333
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 45 tcatggatgaagaagaggttcttcatggaaaccttggttggtgttctgcctcctgagaag 104
Query: 334 gactccatcccctgcaacttcctcctccgtcttctccgagtcgccaacatggttggtgtt 393
||| || |||||||||||||||||||||| || ||| || ||||||||||||||| |||
Sbjct: 105 gacgccgtcccctgcaacttcctcctccgcctcctcagaaccgccaacatggttggcgtt 164
Query: 394 gaggcctcttaccggcaagagctcgagaagcgcatatcgtggcagctagaccaggctgca 453
|||| | |||| |||| ||||| ||||||||||| ||||||||| ||||||||||| |
Sbjct: 165 gagggcagttacaggcaggagctggagaagcgcatttcgtggcagttagaccaggcttcg 224
Query: 454 atcaatgagctcatgattccctctttcagtcacacttgtgggacactccttgatgttgag 513
| || ||||| |||| || ||||||||||||||||||||||| || | ||||||||
Sbjct: 225 ttgaaggagcttgtgataccttctttcagtcacacttgtgggactctgttggatgttgaa 284
Query: 514 cttgtcataaggttggtgaagagatttgtgagctt 548
| || || ||| |||||||||| || ||||||||
Sbjct: 285 ttggtgattaggctggtgaagaggttcgtgagctt 319
>gnl|LJGI|TC69404 similar to UniRef100_A7P7N5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (45%)
Length = 1553
Score = 224 bits (113), Expect = 1e-57
Identities = 227/265 (85%)
Strand = Plus / Plus
Query: 475 tctttcagtcacacttgtgggacactccttgatgttgagcttgtcataaggttggtgaag 534
||||||||||||||||||||||| || | |||||||| | || || ||| ||||||||
Sbjct: 868 tctttcagtcacacttgtgggactctgttggatgttgaattggtgattaggctggtgaag 927
Query: 535 agatttgtgagcttggaccatgaaggagctaaaactggtgctgctttggttaaggtggct 594
|| || ||||||||||| |||||| ||||| | |||||||||||| |||| |||||
Sbjct: 928 aggttcgtgagcttggatagtgaaggggctaagagcggtgctgctttgcttaaagtggcg 987
Query: 595 aagcttgttgattgctaccttgctgaggctgctatggatgccaatttgagcttatctgag 654
||| | ||||||| || |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 988 aagttggttgattcgtatcttgctgaagctgctatggatgccaatttgagcttgtctgag 1047
Query: 655 tttgttgcacttgctggagctcttccaagccatgcaagagctactgatgatggattgtat 714
|||||| | ||||| || ||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 1048 tttgttactcttgcgggtgctcttccaagtcatgcaagagcaatagatgatggattgtac 1107
Query: 715 agagccattgacacttatctaaaag 739
|||||||||||||||||||||||||
Sbjct: 1108 agagccattgacacttatctaaaag 1132
Score = 174 bits (88), Expect = 9e-43
Identities = 115/124 (92%)
Strand = Plus / Plus
Query: 274 tcatggatgaagaagaggttcttcgtggaaaccttggttggtgttctgcctcctgagaag 333
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 592 tcatggatgaagaagaggttcttcatggaaaccttggttggtgttctgcctcctgagaag 651
Query: 334 gactccatcccctgcaacttcctcctccgtcttctccgagtcgccaacatggttggtgtt 393
||| || |||||||||||||||||||||| || ||| || ||||||||||||||| |||
Sbjct: 652 gacgccgtcccctgcaacttcctcctccgcctcctcagaaccgccaacatggttggcgtt 711
Query: 394 gagg 397
||||
Sbjct: 712 gagg 715
Score = 93.7 bits (47), Expect = 3e-18
Identities = 125/151 (82%)
Strand = Plus / Plus
Query: 56 cctcagaatgctggttcgacgatgcatgcatacttgacatggattacttcgtgaagacac 115
|||| ||||||||||||||||| |||||||| || |||||||||||||| |||||||| |
Sbjct: 380 cctctgaatgctggttcgacgacgcatgcatcctcgacatggattactttgtgaagaccc 439
Query: 116 tctcaggcatcaaacagaaaggtgttcgtgctgacttggttggttccatcatcactcact 175
|||| |||||||| ||||| || || || || | | || ||||||||||| ||||
Sbjct: 440 tctccggcatcaaggccaaaggcgtccgcgcaaacctcatcggctccatcatcacgcact 499
Query: 176 acgcttcaaaatggctcccagacatctcttc 206
|||| || ||||||||||| ||| |||||||
Sbjct: 500 acgcctccaaatggctccctgacctctcttc 530
>gnl|LJGI|GO021517
Length = 112
Score = 63.9 bits (32), Expect = 2e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 atgaagaagcagggttgtgaagaatcacttcc 32
||||||||||||||||||||||||||||||||
Sbjct: 81 atgaagaagcagggttgtgaagaatcacttcc 112
>gnl|LJGI|BP038348 weakly similar to UniRef100_A7P7N5 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 500
Score = 58.0 bits (29), Expect = 1e-07
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 1004 tggagataaagaagctgaaggaagaggtttacaggctgcaaagccagtgcaatgccatgc 1063
||||||||| |||||||||||| || || | ||||||||| | ||||||| |||||||
Sbjct: 384 tggagataaggaagctgaaggaggacgtgcagaggctgcaagggcagtgcagcgccatgc 325
Query: 1064 aaatgcagatggagaggatgtcagagaagaaga 1096
| |||||||||||| |||| ||||||||||
Sbjct: 324 aggtgcagatggagaagatggtggagaagaaga 292