Miyakogusa Predicted Gene
- Lj3g3v0116140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0116140.1 tr|G7ID03|G7ID03_MEDTR Histidine decarboxylase
OS=Medicago truncatula GN=MTR_1g099020 PE=3
SV=1,68.18,0,Pyridoxal_deC,Pyridoxal phosphate-dependent
decarboxylase; DDC_GAD_HDC_YDC,Pyridoxal-phosphate bindi,CUFF.40299.1
(1440 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325493 weakly similar to UniRef100_A7QN02 Cluster: Ch... 1407 0.0
gnl|LJGI|TC62576 weakly similar to UniRef100_A7QN02 Cluster: Chr... 793 0.0
gnl|LJGI|BU494238 weakly similar to UniRef100_A7QN02 Cluster: Ch... 767 0.0
gnl|LJGI|TC76878 weakly similar to UniRef100_Q1KSC5 Cluster: Aro... 597 e-170
gnl|LJGI|AV413373 387 e-106
gnl|LJGI|TC80960 weakly similar to UniRef100_Q1KSC5 Cluster: Aro... 341 7e-93
gnl|LJGI|BP071156 similar to UniRef100_A8HMB6 Cluster: Serine de... 163 4e-39
gnl|LJGI|DC595344 103 3e-21
>gnl|LJGI|FS325493 weakly similar to UniRef100_A7QN02 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 812
Score = 1407 bits (710), Expect = 0.0
Identities = 710/710 (100%)
Strand = Plus / Plus
Query: 1 atgaaggacatgattcttgaatcccttttacaatcagcattcaaagagtacttacttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgaaggacatgattcttgaatcccttttacaatcagcattcaaagagtacttacttaag 162
Query: 61 gaggtcccacaaatcaataagccttctagaatagaagagaagatcaatggggaaatccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gaggtcccacaaatcaataagccttctagaatagaagagaagatcaatggggaaatccaa 222
Query: 121 gagaatgaaggatatatgaacctcgacatcaccaagggtttcggggagacacgtgttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gagaatgaaggatatatgaacctcgacatcaccaagggtttcggggagacacgtgttaat 282
Query: 181 ttgtccaaaacaattgctaaatatgtggtgaaactaaatcaaaacaagtcgcgttgttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgtccaaaacaattgctaaatatgtggtgaaactaaatcaaaacaagtcgcgttgttta 342
Query: 241 ggttttcccgttaatcaagaatttgactatgacgccttgatgccattgttgcattatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggttttcccgttaatcaagaatttgactatgacgccttgatgccattgttgcattatcac 402
Query: 301 ttaaacaatgctggtgatccatttcttgggagcggctatggtcaaaattcagtagaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttaaacaatgctggtgatccatttcttgggagcggctatggtcaaaattcagtagaattt 462
Query: 361 gaagtttgtgtgcttgattggttcgccaaactatggcagatagagaagggtgagtattgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gaagtttgtgtgcttgattggttcgccaaactatggcagatagagaagggtgagtattgg 522
Query: 421 ggatacgttaccacaggtggtactgaaggaaatttacatgggattttaatggggagggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggatacgttaccacaggtggtactgaaggaaatttacatgggattttaatggggagggaa 582
Query: 481 aaatttcaagatggaattttatatacatcacacaactcgcattattcattattcaaaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aaatttcaagatggaattttatatacatcacacaactcgcattattcattattcaaaata 642
Query: 541 gcaaggatgtacagaatgcaatgtgtaaaggtcaatacgttggtctcgggtgagattgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gcaaggatgtacagaatgcaatgtgtaaaggtcaatacgttggtctcgggtgagattgat 702
Query: 601 tgtgctaatttaaaggctttacttttatctcacaaggacaaacccgccatcatcaaccta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgtgctaatttaaaggctttacttttatctcacaaggacaaacccgccatcatcaaccta 762
Query: 661 aacataggaacaactatgaaaggagcaattgatgacattgatcttgtgat 710
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aacataggaacaactatgaaaggagcaattgatgacattgatcttgtgat 812
>gnl|LJGI|TC62576 weakly similar to UniRef100_A7QN02 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (35%)
Length = 805
Score = 793 bits (400), Expect = 0.0
Identities = 627/702 (89%), Gaps = 3/702 (0%)
Strand = Plus / Plus
Query: 1 atgaaggacatgattcttgaatcccttttacaatcagcattcaaagagtacttacttaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 107 atgaaggacatgattcttgaatcccttttacaatcagcattcaaagagtatttacataaa 166
Query: 61 gaggtcccacaaatcaataagccttctagaatagaagagaagatcaatggggaaatccaa 120
||||| ||| ||| ||| | ||| || | | |||||||| || ||||||| |||
Sbjct: 167 gaggtaccaaaaaacaacatgccctcagcaggaacagagaaga---attgggaaattcaa 223
Query: 121 gagaatgaaggatatatgaacctcgacatcaccaagggtttcggggagacacgtgttaat 180
|||||||||||| |||||||||| |||||||||||| | ||||||||| |||||| |||
Sbjct: 224 gagaatgaaggacatatgaaccttgacatcaccaagtgcttcggggagtcacgtgccaat 283
Query: 181 ttgtccaaaacaattgctaaatatgtggtgaaactaaatcaaaacaagtcgcgttgttta 240
||||| ||||||||||| |||||||||||||| |||||||||||||| |||| ||||||
Sbjct: 284 ttgtctaaaacaattgccaaatatgtggtgaagctaaatcaaaacaaatcgcaatgttta 343
Query: 241 ggttttcccgttaatcaagaatttgactatgacgccttgatgccattgttgcattatcac 300
|| || || ||||||||||||||| |||||||||| |||| || |||||||||||||||
Sbjct: 344 ggcttcccagttaatcaagaatttaactatgacgcattgacaccgttgttgcattatcac 403
Query: 301 ttaaacaatgctggtgatccatttcttgggagcggctatggtcaaaattcagtagaattt 360
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 404 ttaaacaatgctggcgacccatttctcgggagcggctatggtcaaaattcagtagaattt 463
Query: 361 gaagtttgtgtgcttgattggttcgccaaactatggcagatagagaagggtgagtattgg 420
||||| ||||| ||||||||||| || |||||||||||||| |||||||| || ||||||
Sbjct: 464 gaagtctgtgtacttgattggtttgcaaaactatggcagatggagaagggggattattgg 523
Query: 421 ggatacgttaccacaggtggtactgaaggaaatttacatgggattttaatggggagggaa 480
||||||||||| || ||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 524 ggatacgttacaaccggtggaactgaaggaaatttacacggaattttaatggggagggaa 583
Query: 481 aaatttcaagatggaattttatatacatcacacaactcgcattattcattattcaaaata 540
||||||||| | |||||||||||||| ||| | |||||||||||||||||||||||||||
Sbjct: 584 aaatttcaaaacggaattttatatacctcagagaactcgcattattcattattcaaaata 643
Query: 541 gcaaggatgtacagaatgcaatgtgtaaaggtcaatacgttggtctcgggtgagattgat 600
|||||||||||||||||||||||| |||||||||| || || |||||||| | |||||||
Sbjct: 644 gcaaggatgtacagaatgcaatgtataaaggtcaacacattagtctcgggcgggattgat 703
Query: 601 tgtgctaatttaaaggctttacttttatctcacaaggacaaacccgccatcatcaaccta 660
|||||| ||||||||||||||||| ||| |||||||||||||| || ||||||||||||
Sbjct: 704 tgtgctgatttaaaggctttacttctattgcacaaggacaaaccagctatcatcaaccta 763
Query: 661 aacataggaacaactatgaaaggagcaattgatgacattgat 702
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 764 aacataggaacaactatgaaaggagcaattgataacattgat 805
>gnl|LJGI|BU494238 weakly similar to UniRef100_A7QN02 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(21%)
Length = 434
Score = 767 bits (387), Expect = 0.0
Identities = 394/395 (99%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 1047 agcacaaatgtgcatcacaaaagcatgtcactt-actggacaaactacatgacaatgata 1105
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 agcacaaatgtgcatcacaaaagcatgtcacttcactggacaaactacatgacaatgata 60
Query: 1106 ttggtgcaatgcgaaatgagtttagtaataccgttgtgtttgaaaggcctccagatgatg 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggtgcaatgcgaaatgagtttagtaataccgttgtgtttgaaaggcctccagatgatg 120
Query: 1166 actttgtacgaaaatggaatttgtcttgtgaaggaaatgttgcacatgtggttgtgatgc 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actttgtacgaaaatggaatttgtcttgtgaaggaaatgttgcacatgtggttgtgatgc 180
Query: 1226 agcacgtcactattgaaatgctggactcatttgttagtgaactggttacaaagcgatcct 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcacgtcactattgaaatgctggactcatttgttagtgaactggttacaaagcgatcct 240
Query: 1286 tttggtttcaaggtggacaaagaaagcctccttgcatcgcagacaatgttggtgggaaaa 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttggtttcaaggtggacaaagaaagcctccttgcatcgcagacaatgttggtgggaaaa 300
Query: 1346 attgtgcttgtacattgcataattcatttgacaaagggagggctgcactgaataacacaa 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgtgcttgtacattgcataattcatttgacaaagggagggctgcactgaataacacaa 360
Query: 1406 atgtgatccatgctattataactgacaaaatggat 1440
|||||||||||||||||||||||||||||||||||
Sbjct: 361 atgtgatccatgctattataactgacaaaatggat 395
>gnl|LJGI|TC76878 weakly similar to UniRef100_Q1KSC5 Cluster: Aromatic amino acid
decarboxylase 1B; n=1; Solanum lycopersicum|Rep: Aromatic
amino acid decarboxylase 1B - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (25%)
Length = 827
Score = 597 bits (301), Expect = e-170
Identities = 453/503 (90%), Gaps = 3/503 (0%)
Strand = Plus / Plus
Query: 800 aacaagctccaaggattaacttcaagaagcctatcggaagtatatctatttctggccaca 859
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct: 1 aacaagctccaaggattaacttcaagaagccgattggaagtatatctatttctggccata 60
Query: 860 agttcttaggatgcccaattccttgtggtgttgtaataacacgtacagaacatgtcaatg 919
|||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||| |
Sbjct: 61 agttcttaggatgcccaattccttgtggtgttatattaacacgttcagaacacgtcaacg 120
Query: 920 cactagctagagatgttgaatacattgaatcgagggatgtcacaatcacaggtagccgtt 979
| ||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 121 ctctatctagagatgttgaatatattgaatcaagggatgtcacaatcacaggtagccgtt 180
Query: 980 gtgggcttgcttcaatcttcctctggtatgcactccaagaaagaggtttaataggactta 1039
|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgggcttgcgccaatcttcctttggtatgcactccaagaaagaggtttaataggactta 240
Query: 1040 agagggaagcacaaatgtgcatcacaaaagcatgtcacttactggacaaactacatgaca 1099
|||| ||||||||||||||||| || || || ||||||||||| ||||||||||| |
Sbjct: 241 agagagaagcacaaatgtgcataaccaatgcgcaacacttactggataaactacatgata 300
Query: 1100 atgatattggtgcaatgcgaaatgagtttagtaataccgttgtgtttgaaaggcctccag 1159
| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acggtattggtgccatgcgaaatgagtttagtaataccgttgtgtttgaaaggcct---a 357
Query: 1160 atgatgactttgtacgaaaatggaatttgtcttgtgaaggaaatgttgcacatgtggttg 1219
| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 358 aagatgactttgtgcgaaagtggaatttgtcatgtgaaggaaatgttgcacatgtggtcg 417
Query: 1220 tgatgcagcacgtcactattgaaatgctggactcatttgttagtgaactggttacaaagc 1279
||||||| || ||||||||||||||| | ||||| |||||||||||||| |||| || |
Sbjct: 418 tgatgcaacatgtcactattgaaatgatagactcctttgttagtgaacttgttaacaaac 477
Query: 1280 gatccttttggtttcaaggtgga 1302
| || |||||||||||| ||||
Sbjct: 478 ggaccatttggtttcaagatgga 500
>gnl|LJGI|AV413373
Length = 417
Score = 387 bits (195), Expect = e-106
Identities = 360/415 (86%)
Strand = Plus / Plus
Query: 141 cctcgacatcaccaagggtttcggggagacacgtgttaatttgtccaaaacaattgctaa 200
||||||||| || ||| | |||||||||||||| | |||||||| |||| ||||| ||
Sbjct: 3 cctcgacattactaagtgcttcggggagacacgggccaatttgtctaaaatcattgccaa 62
Query: 201 atatgtggtgaaactaaatcaaaacaagtcgcgttgtttaggttttcccgttaatcaaga 260
|||||||||| |||| |||||||| |||||||||||||| || || ||||||| ||
Sbjct: 63 ctatgtggtgatgttaaaccaaaacaaatcgcgttgtttaggcttccctgttaatctgga 122
Query: 261 atttgactatgacgccttgatgccattgttgcattatcacttaaacaatgctggtgatcc 320
|||||||||||||| |||| || ||||| || ||||||||||| ||||||||||||||
Sbjct: 123 ttttgactatgacgcattgacaccgttgttacaatatcacttaaataatgctggtgatcc 182
Query: 321 atttcttgggagcggctatggtcaaaattcagtagaatttgaagtttgtgtgcttgattg 380
|||||| |||||||||||||| |||||||||| ||||||||||||||||||||| |||||
Sbjct: 183 atttctcgggagcggctatggacaaaattcagcagaatttgaagtttgtgtgctcgattg 242
Query: 381 gttcgccaaactatggcagatagagaagggtgagtattggggatacgttaccacaggtgg 440
||| |||||||||||||| || ||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 243 gtttgccaaactatggcaaatggagaagggtgaatattggggatatgttacaacaggtgg 302
Query: 441 tactgaaggaaatttacatgggattttaatggggagggaaaaatttcaagatggaatttt 500
||||||||||| |||||||| ||||||||||||||||||||||||||| | || ||| |
Sbjct: 303 gactgaaggaaacttacatggaattttaatggggagggaaaaatttcaaaacgggattct 362
Query: 501 atatacatcacacaactcgcattattcattattcaaaatagcaaggatgtacaga 555
|||||| ||| | ||||| ||||| |||||||||||||| | || ||||||||||
Sbjct: 363 atatacctcagagaactctcattactcattattcaaaattgtaatgatgtacaga 417
>gnl|LJGI|TC80960 weakly similar to UniRef100_Q1KSC5 Cluster: Aromatic amino acid
decarboxylase 1B; n=1; Solanum lycopersicum|Rep: Aromatic
amino acid decarboxylase 1B - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (14%)
Length = 563
Score = 341 bits (172), Expect = 7e-93
Identities = 286/324 (88%)
Strand = Plus / Plus
Query: 1051 caaatgtgcatcacaaaagcatgtcacttactggacaaactacatgacaatgatattggt 1110
||||| ||||||||||| ||| |||||||||| || ||||||||||| |||| |||||||
Sbjct: 6 caaatatgcatcacaaatgcaagtcacttacttgataaactacatgataatggtattggt 65
Query: 1111 gcaatgcgaaatgagtttagtaataccgttgtgtttgaaaggcctccagatgatgacttt 1170
|||||||||||||||||||||||||| ||| | ||||||||||||| |||||||||||||
Sbjct: 66 gcaatgcgaaatgagtttagtaatactgttatatttgaaaggcctctagatgatgacttt 125
Query: 1171 gtacgaaaatggaatttgtcttgtgaaggaaatgttgcacatgtggttgtgatgcagcac 1230
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gtccgaaagtggaatttgtcttgtgaaggaaatgttgcacatgtggttgtgatgcagcat 185
Query: 1231 gtcactattgaaatgctggactcatttgttagtgaactggttacaaagcgatccttttgg 1290
||||| ||||| ||||| |||||||||||||||||||| |||| || || |||||
Sbjct: 186 gtcaccattgagatgctagactcatttgttagtgaacttgttaacaaacggaaagtttgg 245
Query: 1291 tttcaaggtggacaaagaaagcctccttgcatcgcagacaatgttggtgggaaaaattgt 1350
||||||| ||||||||||||| |||| ||||| || ||| |||||||| || ||||||
Sbjct: 246 tttcaagatggacaaagaaagtctccgtgcattgcgaacagcgttggtggaaacaattgt 305
Query: 1351 gcttgtacattgcataattcattt 1374
|||||| ||||||||||||||||
Sbjct: 306 gcttgtggattgcataattcattt 329
>gnl|LJGI|BP071156 similar to UniRef100_A8HMB6 Cluster: Serine decarboxylase; n=1;
Chlamydomonas reinhardtii|Rep: Serine decarboxylase -
Chlamydomonas reinhardtii, partial (5%)
Length = 389
Score = 163 bits (82), Expect = 4e-39
Identities = 172/202 (85%)
Strand = Plus / Minus
Query: 1166 actttgtacgaaaatggaatttgtcttgtgaaggaaatgttgcacatgtggttgtgatgc 1225
||||||| ||||| |||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 389 actttgtgcgaaagtggagtttgtcttgtgaaggagatgttgcacatgtggttgtgatga 330
Query: 1226 agcacgtcactattgaaatgctggactcatttgttagtgaactggttacaaagcgatcct 1285
|||| || |||||||||||| | ||||| |||||| |||| || || | ||| |||||
Sbjct: 329 agcatgttactattgaaatgatagactcttttgttggtgagcttgtgaaaaaaagatcca 270
Query: 1286 tttggtttcaaggtggacaaagaaagcctccttgcatcgcagacaatgttggtgggaaaa 1345
| ||||||||||||||||||| ||| || || ||||| ||| ||| ||||||| | |||
Sbjct: 269 tatggtttcaaggtggacaaataaaacccccatgcattgcaaacactgttggtagagaaa 210
Query: 1346 attgtgcttgtacattgcataa 1367
||||||||||| ||||||||||
Sbjct: 209 attgtgcttgtgcattgcataa 188
>gnl|LJGI|DC595344
Length = 355
Score = 103 bits (52), Expect = 3e-21
Identities = 136/164 (82%)
Strand = Plus / Plus
Query: 139 aacctcgacatcaccaagggtttcggggagacacgtgttaatttgtccaaaacaattgct 198
||||| ||||||||||| ||| ||||||||||| |||||||| || |||| |||||
Sbjct: 184 aaccttgacatcaccaatttttttggggagacacgcgttaatttatctaaaattattgcc 243
Query: 199 aaatatgtggtgaaactaaatcaaaacaagtcgcgttgtttaggttttcccgttaatcaa 258
||||||||||||| || ||||||||||| |||||| |||||||| || |||||||
Sbjct: 244 aaatatgtggtgatgctgaatcaaaacaaacagcgttgcttaggtttccctgttaatctg 303
Query: 259 gaatttgactatgacgccttgatgccattgttgcattatcactt 302
||||||||||| || || |||| |||||||||||||| |||||
Sbjct: 304 gaatttgactacgatgcgttgacaccattgttgcattaccactt 347