Miyakogusa Predicted Gene
- Lj3g3v0095850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0095850.1 tr|E6NU95|E6NU95_9ROSI JHL06B08.6 protein
OS=Jatropha curcas GN=JHL06B08.6 PE=4 SV=1,93.91,0,domain present in
cyclins, TFIIB and Retinob,Cyclin-like; TFIIB,Transcription factor
TFIIB, conserve,CUFF.40277.1
(939 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66310 homologue to UniRef100_P48513 Cluster: Transcri... 747 0.0
gnl|LJGI|TC72189 homologue to UniRef100_A7PWI7 Cluster: Chromoso... 670 0.0
gnl|LJGI|TC81989 homologue to UniRef100_P48513 Cluster: Transcri... 248 5e-65
gnl|LJGI|TC80160 homologue to UniRef100_P48513 Cluster: Transcri... 194 7e-49
>gnl|LJGI|TC66310 homologue to UniRef100_P48513 Cluster: Transcription initiation
factor IIB; n=1; Glycine max|Rep: Transcription
initiation factor IIB - Glycine max (Soybean), partial
(62%)
Length = 766
Score = 747 bits (377), Expect = 0.0
Identities = 536/589 (91%)
Strand = Plus / Plus
Query: 351 taggttgggactcgttgcgacgatcaaggatcgggctaatgagatatataagcgggttga 410
|||||||||||||||||| || ||||||||||| || ||||||||||||||| |||||||
Sbjct: 1 taggttgggactcgttgcaaccatcaaggatcgtgcaaatgagatatataagagggttga 60
Query: 411 agatcagaagtctagcagaggaagaaatcaggacgcattattggctgcttgcctctacat 470
|||||| |||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 61 agatcaaaagtctagtagagggagaaatcaagacgctttattggctgcttgtctctacat 120
Query: 471 agcttgtcgacaagaagacaagccacgcactgtaaaggagatttgctctgttgccaatgg 530
||||| ||||| |||||||| || || ||||||||||| ||||||||| ||||||||||
Sbjct: 121 tgcttgccgacaggaagacaaacctcgtactgtaaaggaaatttgctctattgccaatgg 180
Query: 531 agccaccaagaaggaaattggccgagcaaaagagtacatagtgaaacaactgggtttgga 590
|| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 ggctacaaagaaggaaattggccgagcaaaagaatacatagtgaaacaactgggtttgga 240
Query: 591 gaacggtcaatctgtagagatgggaacaatacatgctggggactttatgaggcgattttg 650
||| ||||| ||||| |||||||| ||||||||||||||||||||||||||| |||| ||
Sbjct: 241 gaagggtcagtctgtggagatgggtacaatacatgctggggactttatgaggagattctg 300
Query: 651 ttctaatcttggtatgaataatcaagctgttaaagctgctcaggaagctgttcagaaatc 710
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttccaatctcggcatgaataatcaagctgttaaagctgctcaggaagctgttcagaaatc 360
Query: 711 agaagaatttgatataaggaggagtcccatatcaattgctgcagctgttatatacatcat 770
||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 361 agaagaatttgatataaggaggagtcctatatcaattactgcagctgttatctacatcat 420
Query: 771 aactcaactttcggatgataaaaaacctctcaaagatatatcagtagccacaggagttgc 830
||||||||| || |||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 421 aactcaactctctgatgataaaaaacctctcaaagatatatcaattgcaacaggagttgc 480
Query: 831 agaaggaaccattaggaactcatacaaggatctttacccacatgtttcgaaaataatacc 890
||||||||| ||||||||||| |||||||||||||| || |||||||| |||||||||||
Sbjct: 481 agaaggaacaattaggaactcctacaaggatctttatccccatgtttcaaaaataatacc 540
Query: 891 aaactggtatgcaaaagaagaggatttaaagaacctttgcagcccttga 939
|| |||||||| || || |||||||| |||||||||| ||| ||||||
Sbjct: 541 aacttggtatgctaaggaggaggatttgaagaacctttccagtccttga 589
>gnl|LJGI|TC72189 homologue to UniRef100_A7PWI7 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 489
Score = 670 bits (338), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Plus
Query: 5 ccgacacattctgctccgactgcaagcgccagacggaggtggtcttcgatcactcagccg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ccgacacattctgctccgactgcaagcgccagacggaggtggtcttcgatcactcagccg 211
Query: 65 gcgacacagtctgctccgaatgcggcctcgtcctcgagtctcactccattgatgaaacct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gcgacacagtctgctccgaatgcggcctcgtcctcgagtctcactccattgatgaaacct 271
Query: 125 ccgagtggcgaacgttcgcaaacgaggccggcgataacgaccctgttcgtgttggagggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ccgagtggcgaacgttcgcaaacgaggccggcgataacgaccctgttcgtgttggagggc 331
Query: 185 cctctaacccgcttctcactgacggtggcctctccactgttattgctaagaccaacggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cctctaacccgcttctcactgacggtggcctctccactgttattgctaagaccaacggct 391
Query: 245 cctccggtgagttcctctcggcttccctcggccgctggcagaatcgcggttcgaaccctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cctccggtgagttcctctcggcttccctcggccgctggcagaatcgcggttcgaaccctg 451
Query: 305 atcgcggtcttatcatggcgtttaagaccattgctacc 342
||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atcgcggtcttatcatggcgtttaagaccattgctacc 489
>gnl|LJGI|TC81989 homologue to UniRef100_P48513 Cluster: Transcription initiation
factor IIB; n=1; Glycine max|Rep: Transcription
initiation factor IIB - Glycine max (Soybean), partial
(13%)
Length = 445
Score = 248 bits (125), Expect = 5e-65
Identities = 128/129 (99%)
Strand = Plus / Plus
Query: 811 tcagtagccacaggagttgcagaaggaaccattaggaactcatacaaggatctttaccca 870
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcagtagccacaggagttgcagaaggaaccattaggaactcatacaaggatctttacccc 60
Query: 871 catgtttcgaaaataataccaaactggtatgcaaaagaagaggatttaaagaacctttgc 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgtttcgaaaataataccaaactggtatgcaaaagaagaggatttaaagaacctttgc 120
Query: 931 agcccttga 939
|||||||||
Sbjct: 121 agcccttga 129
>gnl|LJGI|TC80160 homologue to UniRef100_P48513 Cluster: Transcription initiation
factor IIB; n=1; Glycine max|Rep: Transcription
initiation factor IIB - Glycine max (Soybean), partial
(32%)
Length = 351
Score = 194 bits (98), Expect = 7e-49
Identities = 233/278 (83%)
Strand = Plus / Plus
Query: 25 tgcaagcgccagacggaggtggtcttcgatcactcagccggcgacacagtctgctccgaa 84
|||||||| |||||||||||||| ||||||||||| || |||||||| || ||||| ||
Sbjct: 73 tgcaagcggcagacggaggtggtgttcgatcactcggcgggcgacaccgtgtgctcggag 132
Query: 85 tgcggcctcgtcctcgagtctcactccattgatgaaacctccgagtggcgaacgttcgca 144
|||||||| || |||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 133 tgcggcctggtgctcgagtcccactccatcgatgaaacctccgagtggcgcaccttcgcc 192
Query: 145 aacgaggccggcgataacgaccctgttcgtgttggagggccctctaacccgcttctcact 204
|||||| ||||||| |||||||| || |||||||| || ||||| ||||| || || ||
Sbjct: 193 aacgagtccggcgacaacgaccccgtccgtgttggcggcccctccaaccctctcctgacc 252
Query: 205 gacggtggcctctccactgttattgctaagaccaacggctcctccggtgagttcctctcg 264
||||| ||||| ||||| | ||| |||| | || ||| |||||| || ||||||||
Sbjct: 253 gacggcggcctttccaccatgatttctaaccctaaaggcggctccggcgatttcctctcc 312
Query: 265 gcttccctcggccgctggcagaatcgcggttcgaaccc 302
| |||||||||||||||||||||||||| || |||||
Sbjct: 313 tcctccctcggccgctggcagaatcgcggctccaaccc 350