Miyakogusa Predicted Gene
- Lj3g3v0075610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0075610.1 Non Chatacterized Hit- tr|I1LHK7|I1LHK7_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,60.42,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; SET,SET domain;
PRE_SET,Pre-SET domain; POST_SET,Post-SET doma,CUFF.40276.1
(3996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO016081 weakly similar to UniRef100_A7PV29 Cluster: Ch... 609 e-173
gnl|LJGI|FS345857 weakly similar to UniRef100_A7PV29 Cluster: Ch... 488 e-136
gnl|LJGI|BP065960 weakly similar to UniRef100_A9SP28 Cluster: Pr... 345 1e-93
gnl|LJGI|BP066597 similar to UniRef100_A2QQQ8 Cluster: Contig An... 208 2e-52
gnl|LJGI|AV415450 weakly similar to UniRef100_A7PV29 Cluster: Ch... 133 9e-30
gnl|LJGI|FS318937 similar to UniRef100_A3X762 Cluster: ABC trans... 111 3e-23
gnl|LJGI|TC68342 similar to UniRef100_A7PV29 Cluster: Chromosome... 96 2e-18
>gnl|LJGI|GO016081 weakly similar to UniRef100_A7PV29 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 902
Score = 609 bits (307), Expect = e-173
Identities = 607/701 (86%), Gaps = 7/701 (0%)
Strand = Plus / Minus
Query: 240 ttttgactttcaagtggaaaaccaaaagaaatcttgcagtttgcatgctattgaagataa 299
|||||||| ||||||||||| |||| ||||| |||| ||||||||||| || | ||||||
Sbjct: 902 ttttgactctcaagtggaaa-ccaagagaaa-cttgtagtttgcatgccat-gcagataa 846
Query: 300 tgacataaatgaacctcgcttaacctctgcaaactctctctctatagttgatttgaccga 359
|||||||||||||||||||||||| |||| ||||||||||||| || ||||||| ||
Sbjct: 845 tgacataaatgaacctcgcttaac-tctgaggactctctctctatggtagatttgattga 787
Query: 360 aagcgaatcgccaaacaccggtaaggaaggagcactgtcattttctgaacccacttggct 419
|| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 786 aaatgaatcgccaaacaccggtagggaaggagcattgtcattttctgaacccgcttggct 727
Query: 420 gaagg---aagatgtgtctatagcattatgggtcaagtggagagggacgtggcaggtctg 476
||| |||| | | | || ||||||||||| |||||||||||||| |||| || | |
Sbjct: 726 agagggggaagaagagacgatggcattatgggtaaagtggagagggacatggctggccgg 667
Query: 477 cataaaatgcgcaagggctgactggccattatcaacattgaaagcaaaaccgactcatga 536
||||||||| | ||||||||||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 666 cataaaatgtgtgagggctgactgtccattattaacattgaaagcaaaaccaactcatga 607
Query: 537 acagaagagatatttcgtcatctttttccctctcacaaaggtttacttttgggctgatac 596
|||||||| |||||||||||||||||||||| ||||||| |||| ||||||| | |
Sbjct: 606 acagaagaattatttcgtcatctttttccctcacacaaagaaatactcttgggctaacat 547
Query: 597 gctgcttgttcgatcgattgatgagtttccacagcctatagcatataaaactcaccaaga 656
||||||||||||| |||| ||||||||||| ||||| | ||||| ||||||| || ||
Sbjct: 546 gctgcttgttcgaccgatcgatgagtttccgcagccgaccgcatacgaaactcatcagga 487
Query: 657 aggactggaaatggtaaaagacttgagtgttgcgcgacggttcataatgcaaaagcttgc 716
|| ||||||||| ||||||||||||| ||||| ||||||||||| ||||||| | || ||
Sbjct: 486 agcactggaaatcgtaaaagacttgactgttgtgcgacggttcacaatgcaagatctagc 427
Query: 717 tgtcagcatactgaacactcttgatcagcttcattctaatgctttagtaggaactgcttg 776
| |||||| || |||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 426 ccttagcatattgtacactcttgatcagcttcattcccatgctttagtagaaactgcttg 367
Query: 777 tgatgtgatggtctggaaggaacttgctatggaggcttctcgttgtaacacttattcgga 836
||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||| ||
Sbjct: 366 tgatgtgatggtctggaaggaacttgcaatgaaggcttctagttgtaacgcttattcaga 307
Query: 837 tttggggagaatgcttctcaagctactaaatagcatagcgccatgctacataaatgcaga 896
|||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| ||
Sbjct: 306 tttggggagaatgcttctcaagctacaaaatagcatagcgctgcggtacataagtgctga 247
Query: 897 ctgggttaattcttcgtctgactcttgggcggaacgatgcc 937
|||| | |||||||||| |||| ||||||||||||||||||
Sbjct: 246 ctggatcaattcttcgtttgacacttgggcggaacgatgcc 206
>gnl|LJGI|FS345857 weakly similar to UniRef100_A7PV29 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 785
Score = 488 bits (246), Expect = e-136
Identities = 426/486 (87%)
Strand = Plus / Minus
Query: 452 agtggagagggacgtggcaggtctgcataaaatgcgcaagggctgactggccattatcaa 511
||||||||||||| |||| || | |||||||||| | ||||||||||| ||||||| ||
Sbjct: 712 agtggagagggacatggctggccggcataaaatgtgtgagggctgactgtccattattaa 653
Query: 512 cattgaaagcaaaaccgactcatgaacagaagagatatttcgtcatctttttccctctca 571
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 652 cattgaaagcaaaaccaactcatgaacagaagaattatttcgtcatctttttccctcaca 593
Query: 572 caaaggtttacttttgggctgatacgctgcttgttcgatcgattgatgagtttccacagc 631
||||| |||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||
Sbjct: 592 caaagaaatactcttgggctgacatgctgcttgttcgaccgatcgatgagtttccgcagc 533
Query: 632 ctatagcatataaaactcaccaagaaggactggaaatggtaaaagacttgagtgttgcgc 691
| | ||||| ||||||| || |||| ||||||||| ||||||||||||| ||||| ||
Sbjct: 532 cgaccgcatacgaaactcatcaggaagcactggaaatcgtaaaagacttgactgttgtgc 473
Query: 692 gacggttcataatgcaaaagcttgctgtcagcatactgaacactcttgatcagcttcatt 751
||||||||| ||||||| | || || | |||||| || |||||||||||||||||||||
Sbjct: 472 gacggttcacaatgcaagatctagcccttagcatattgtacactcttgatcagcttcatt 413
Query: 752 ctaatgctttagtaggaactgcttgtgatgtgatggtctggaaggaacttgctatggagg 811
| |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 412 cccatgctttagtagaaactgcttgtgatgtgatggtctggaaggaacttgcaatgaagg 353
Query: 812 cttctcgttgtaacacttattcggatttggggagaatgcttctcaagctactaaatagca 871
||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 352 cttctagttgtaacgcttattcagatttggggagaatgcttctcaagctacaaaatagca 293
Query: 872 tagcgccatgctacataaatgcagactgggttaattcttcgtctgactcttgggcggaac 931
|||||| | ||||||| ||| |||||| | |||||||||| |||||||||||||||||
Sbjct: 292 tagcgctgcggtacataagtgctgactggatcaattcttcgtttgactcttgggcggaac 233
Query: 932 gatgcc 937
||||||
Sbjct: 232 gatgcc 227
>gnl|LJGI|BP065960 weakly similar to UniRef100_A9SP28 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(5%)
Length = 473
Score = 345 bits (174), Expect = 1e-93
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 3823 aattaccaagtttttgttgagagcatggactgtaagcgttcccatattggtctttatgcg 3882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aattaccaagtttttgttgagagcatggactgtaagcgttcccatattggtctttatgcg 414
Query: 3883 agtcgagacattgctttgggtgaagaattgacatttgattatcacaaggttgggcctgga 3942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtcgagacattgctttgggtgaagaattgacatttgattatcacaaggttgggcctgga 354
Query: 3943 aaaggaactccttgtctttgcggatcttcgaattgcgggggacgcctttactag 3996
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aaaggaactccttgtctttgcggatcttcgaattgcgggggacgcctttactag 300
>gnl|LJGI|BP066597 similar to UniRef100_A2QQQ8 Cluster: Contig An08c0100, complete
genome; n=1; Aspergillus niger|Rep: Contig An08c0100,
complete genome - Aspergillus niger, partial (3%)
Length = 534
Score = 208 bits (105), Expect = 2e-52
Identities = 105/105 (100%)
Strand = Plus / Minus
Query: 3892 attgctttgggtgaagaattgacatttgattatcacaaggttgggcctggaaaaggaact 3951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 attgctttgggtgaagaattgacatttgattatcacaaggttgggcctggaaaaggaact 368
Query: 3952 ccttgtctttgcggatcttcgaattgcgggggacgcctttactag 3996
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccttgtctttgcggatcttcgaattgcgggggacgcctttactag 323
>gnl|LJGI|AV415450 weakly similar to UniRef100_A7PV29 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 426
Score = 133 bits (67), Expect = 9e-30
Identities = 157/187 (83%)
Strand = Plus / Plus
Query: 3217 ccttgggagagcttcacatatgttacaaaacccaggctttatcaatcacttattattcat 3276
|||||||||||||| || ||||||||||| || | ||| ||||||| |||| | || ||
Sbjct: 239 ccttgggagagctttacctatgttacaaagccaatacttgatcaatcccttagtcttgat 298
Query: 3277 gatgagagtctgcggatgggatgctactgctcattttctacctgctgtcctgaaacatgt 3336
|||||||||| | ||||||| |||||||| ||||||||||||||| |||||||||
Sbjct: 299 tcagagagtctgcagttgggatgtgcctgctcatattctacctgctgtcccgaaacatgt 358
Query: 3337 gatcatgtgtgcctttttgataatgactttgatgatgcgaaagacgtatttggaaaacca 3396
|||||||| | ||||||| || ||||| || |||||| |||||||||||||| ||||||
Sbjct: 359 gatcatgtttatctttttggtactgactatgttgatgctaaagacgtatttgggaaacca 418
Query: 3397 atgcgtg 3403
|||||||
Sbjct: 419 atgcgtg 425
Score = 81.8 bits (41), Expect = 3e-14
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 3133 tgtgatgacataagctttgggaaggaatcaattccagtgatttgtgtag 3181
||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 122 tgtgatgacattagctttgggaaggagtcaattccagtgatttgtgtag 170
>gnl|LJGI|FS318937 similar to UniRef100_A3X762 Cluster: ABC transporter, permease
protein; n=1; Roseobacter sp. MED193|Rep: ABC
transporter, permease protein - Roseobacter sp. MED193,
partial (7%)
Length = 774
Score = 111 bits (56), Expect = 3e-23
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 11 ttcctggttctgatattcagcgtgctgtggaatccgattgctctcagccgaattcaagaa 70
||||| ||||||||| ||||||||||| |||||||||| ||||||||| ||||| | |||
Sbjct: 677 ttccttgttctgatactcagcgtgctgcggaatccgatcgctctcagctgaatttaggaa 736
Query: 71 caaattatctgtaccaggtagaacctattaactgcg 106
||| |||||||||||||| |||||||||||| ||||
Sbjct: 737 caagttatctgtaccaggaagaacctattaattgcg 772
>gnl|LJGI|TC68342 similar to UniRef100_A7PV29 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 607
Score = 95.6 bits (48), Expect = 2e-18
Identities = 179/222 (80%), Gaps = 3/222 (1%)
Strand = Plus / Plus
Query: 3778 aatgtctctaggttcatcaatagcagctgctcacccaatcttgtgaattaccaagttttt 3837
||||| || |||||||||||| |||||||||||| ||||||| | | | |||||| |
Sbjct: 23 aatgtgtcaaggttcatcaatcatagctgctcaccccatcttgtcagtcatcaagttctc 82
Query: 3838 gttgagagcatggactgtaagcgttcccatattggtctttatgcgagtcgagacattgct 3897
| ||||||||||| ||| ||||| | ||||| ||||||||||| |||||||| ||||||
Sbjct: 83 atagagagcatggattgtgagcgtacacatatcggtctttatgcaagtcgagatattgct 142
Query: 3898 ttgggtgaagaattgacatttgattatc---acaaggttgggcctggaaaaggaactcct 3954
||||||||||| |||| | ||| |||| | || ||| ||||||| ||||| | |||
Sbjct: 143 ttgggtgaagagctgacttatgactatcagtatgagcttgtgcctggagaaggatcgcct 202
Query: 3955 tgtctttgcggatcttcgaattgcgggggacgcctttactag 3996
|||||||||| ||| | ||| || |||| ||||||||||||
Sbjct: 203 tgtctttgcgaatcgttgaagtgtagggggcgcctttactag 244