Miyakogusa Predicted Gene

Lj3g3v0065490.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0065490.1 tr|G7II65|G7II65_MEDTR S-locus-specific
glycoprotein S6 OS=Medicago truncatula GN=MTR_2g103810 PE=3
,81.56,0,no description,Bulb-type lectin domain; no description,NULL;
Protein kinase-like (PK-like),Protein k,CUFF.40246.1
         (2435 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61873 similar to UniRef100_A7P5U0 Cluster: Chromosome...   151   2e-35
gnl|LJGI|TC59082 weakly similar to UniRef100_A7PF57 Cluster: Chr...    64   4e-09

>gnl|LJGI|TC61873 similar to UniRef100_A7P5U0 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (25%)
          Length = 780

 Score =  151 bits (76), Expect = 2e-35
 Identities = 193/232 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1840 atcaagccacaaaatgttcttcttgatgacaatttcatggctaaagtctcagattttgga 1899
            ||||||||| ||||||| ||||| |||||  |||||||||||||||| ||||||||||| 
Sbjct: 1    atcaagccagaaaatgtgcttctggatgatcatttcatggctaaagtttcagattttggc 60

                                                                        
Query: 1900 ttggctaagctaatgagcagagaacaaagtcatgtcttcacaactatgagaggcacaaga 1959
             | || |||||||||| | |||||||||| ||||| ||||||||  ||||||||||  | 
Sbjct: 61   ctcgcgaagctaatgaaccgagaacaaagccatgttttcacaacactgagaggcactcgg 120

                                                                        
Query: 1960 gggtatttggctccagaatggattactaactatgcaatttcagagaagagtgatgtgttc 2019
            || ||  | || || || ||||| || |||||||| || |||||||| |||||||||| |
Sbjct: 121  ggctaccttgccccggagtggataacaaactatgctatatcagagaaaagtgatgtgtac 180

                                                                
Query: 2020 agctatgggatgctcttgcttgagatcattggaggaaggaagaactatgatc 2071
            |||||||||||| |  |||| ||||||||||| || ||||| ||||||||||
Sbjct: 181  agctatgggatggtgctgctagagatcattggcgggaggaaaaactatgatc 232


>gnl|LJGI|TC59082 weakly similar to UniRef100_A7PF57 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 903

 Score = 63.9 bits (32), Expect = 4e-09
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 444 aattgtttggcagagttttagccaccctactgatac 479
           ||||||||||||||||||||||||||| ||||||||
Sbjct: 602 aattgtttggcagagttttagccacccaactgatac 637