Miyakogusa Predicted Gene
- Lj3g3v0044100.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0044100.2 Non Chatacterized Hit- tr|Q6MCF0|Q6MCF0_PARUW
Putative uncharacterized protein OS=Protochlamydia
amo,36.08,7e-19,RNI-like,NULL; Leucine-rich repeat - CC
(cysteine-containin,Leucine-rich repeat,
cysteine-containing,CUFF.40232.2
(822 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO006992 weakly similar to UniRef100_Q9LMR0 Cluster: F7... 981 0.0
gnl|LJGI|TC69485 similar to UniRef100_A7QQ79 Cluster: Chromosome... 64 1e-09
>gnl|LJGI|GO006992 weakly similar to UniRef100_Q9LMR0 Cluster: F7H2.8 protein; n=1;
Arabidopsis thaliana|Rep: F7H2.8 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (26%)
Length = 754
Score = 981 bits (495), Expect = 0.0
Identities = 509/511 (99%), Gaps = 2/511 (0%)
Strand = Plus / Plus
Query: 1 atgcataactataacacattttcttcactgccaagggacttgactcaacaaatttttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atgcataactataacacattttcttcactgccaagggacttgactcaacaaatttttaac 292
Query: 61 accttggtttatacatgttgtctcacacctgtttcgttccaagctttccgagattgttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 accttggtttatacatgttgtctcacacctgtttcgttccaagctttccgagattgttcc 352
Query: 121 ctcgaggatctttacttgggagaatatgctggtgctgttgtcaatgatggttggatggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctcgaggatctttacttgggagaatatgctggtgctgttgtcaatgatggttggatggat 412
Query: 181 gtaatctcatcacaggggttatctttgttgcatgtggatctttctggcactgatttcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtaatctcatcacaggggttatctttgttgcatgtggatctttctggcactgatttcaca 472
Query: 241 gatcagggccttgcctgtcttagagattgcaaaaatactatttctctgaatcttaattac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gatcagggccttgcctgtcttagagattgcaaaaatactatttctctgaatcttaattac 532
Query: 301 tgtcaccaaatttcagattgtggattggagtacatcagtggtctctcaaacttggaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgtcaccaaatttcagattgtggattggagtacatcagtggtctctcaaacttggaaagt 592
Query: 361 ttgagttttagaagaaacgcagcaatttcagctcaaggattgagtaacatttctggtctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttgagttttagaagaaacgcagcaatttcagctcaaggattgagtaacatttctggtctt 652
Query: 421 tctaacttggtgaaattggatttggagagatgtcctcggattcatggaggcattgctcat 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 653 tctaacttggtgaaattggatttggagagatgtcctcggattcatgga-gcattgctcat 711
Query: 481 cttcaaggtttatccaagttggaatctctta 511
|||||| ||||||||||||||||||||||||
Sbjct: 712 cttcaa-gtttatccaagttggaatctctta 741
>gnl|LJGI|TC69485 similar to UniRef100_A7QQ79 Cluster: Chromosome undetermined
scaffold_141, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_141,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 654
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 101 aagctttccgagattgttccctcgaggatctttacttgggagaatatg 148
||||||| ||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 494 aagcttttcgagattgtgctctccaggatctttacttgggagaatatg 541