Miyakogusa Predicted Gene
- Lj3g3v0042050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0042050.1 Non Chatacterized Hit- tr|I1ISY6|I1ISY6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,38.41,5e-19,Broad-Complex, Tramtrack and Bric a brac,BTB/POZ-like;
POZ domain,BTB/POZ fold; SUBFAMILY NOT NAMED,,CUFF.40225.1
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78370 similar to UniRef100_O82343 Cluster: Expressed ... 1195 0.0
gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed ... 613 e-175
gnl|LJGI|TC73952 similar to UniRef100_O82343 Cluster: Expressed ... 381 e-105
gnl|LJGI|FS332142 similar to UniRef100_O82343 Cluster: Expressed... 266 1e-70
gnl|LJGI|TC62135 similar to UniRef100_O82343 Cluster: Expressed ... 242 2e-63
gnl|LJGI|TC65663 similar to UniRef100_A7PZQ8 Cluster: Chromosome... 192 2e-48
gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome... 145 4e-34
gnl|LJGI|DC599778 weakly similar to UniRef100_A9S1Y2 Cluster: Pr... 88 7e-17
gnl|LJGI|BW596436 similar to UniRef100_O82343 Cluster: Expressed... 82 5e-15
gnl|LJGI|FS326466 similar to UniRef100_O82343 Cluster: Expressed... 58 7e-08
>gnl|LJGI|TC78370 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (43%)
Length = 1014
Score = 1195 bits (603), Expect = 0.0
Identities = 603/603 (100%)
Strand = Plus / Plus
Query: 1 atggagtcggattccaattttaatgttggcttcgctttcaatgacagccgtttctcagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atggagtcggattccaattttaatgttggcttcgctttcaatgacagccgtttctcagac 121
Query: 61 aaggttctccgtatcgaggtaatgaccgacccgtttgatagtgtcacctccatcgctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaggttctccgtatcgaggtaatgaccgacccgtttgatagtgtcacctccatcgctgac 181
Query: 121 tggcttcgccactgcaagaagaggagacgcgaaaacggtgatgaagctgcaaactgtaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tggcttcgccactgcaagaagaggagacgcgaaaacggtgatgaagctgcaaactgtaac 241
Query: 181 atggatggctctgccgctacagttgttagagttaaaacactgcatataagttctcctatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atggatggctctgccgctacagttgttagagttaaaacactgcatataagttctcctatc 301
Query: 241 ctggctgctaaaagccctttcttctaccagcttttctcaaatgtgacgagtgagtcagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctggctgctaaaagccctttcttctaccagcttttctcaaatgtgacgagtgagtcagag 361
Query: 301 cagagacatatcaccctcagtattaatgcatctgaagaaactggtctcatggagctactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagagacatatcaccctcagtattaatgcatctgaagaaactggtctcatggagctactc 421
Query: 361 aaatttatgtatagtaataccttgaatatttctgcggcacctgctttactggatgtgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaatttatgtatagtaataccttgaatatttctgcggcacctgctttactggatgtgctt 481
Query: 421 atggctgcggataaatttgatgtgccttcatgcatgaaatacttgctaaattcgcccatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atggctgcggataaatttgatgtgccttcatgcatgaaatacttgctaaattcgcccatg 541
Query: 481 acaactgactctgcattactctacctggagcttcctcatactgttgttgcagcccaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acaactgactctgcattactctacctggagcttcctcatactgttgttgcagcccaacca 601
Query: 541 ctgattgatgctgcaaagcagtatcttgttgaccgatacaaggatataacccacaaacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctgattgatgctgcaaagcagtatcttgttgaccgatacaaggatataacccacaaacag 661
Query: 601 ttt 603
|||
Sbjct: 662 ttt 664
>gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 792
Score = 613 bits (309), Expect = e-175
Identities = 385/409 (94%), Gaps = 1/409 (0%)
Strand = Plus / Plus
Query: 180 catggatggctctgccgctacagttgttagagttaaaacactgcatataagttctcctat 239
||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||| |||
Sbjct: 264 catggattactctggcgctactgttgttagagttaaaacactgcatatcagttctcttat 323
Query: 240 cctggctgctaaaagccctttcttctaccagcttttctcaaatgtgacgagtgagtcaga 299
|||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||
Sbjct: 324 cctggctgctaaaagccctttcttctacaagcttttctcaaatgggatgagtgagtcaga 383
Query: 300 gcagagacatatcaccctcagtattaatgcatctgaagaaactggtctcatggagctact 359
||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 384 gcagagacagatcaccctcaggattaatgcatctgaagaagctggtctcatggagctact 443
Query: 360 caaatttatgtatagtaataccttgaatatttctgcggcacctgctttactggatgtgct 419
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 444 caaatttatgtatagtaataccttgaatatttctgccacacctgctttgctggatgtgct 503
Query: 420 tatggctgcggataaatttgatgtgccttcatgcatgaaatacttgctaaattcgccca- 478
|||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 tatggcggctgataaatttgatgtgccttcatgcatgaaatacttgctaaatccgcccat 563
Query: 479 tgacaactgactctgcattactctacctggagcttcctcatactgttgttgcagcccaac 538
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 564 tgacacttgactctgcattactctacctggagcttccttatactgttgttgcagcccaac 623
Query: 539 cactgattgatgctgcaaagcagtatcttgttgaccgatacaaggatat 587
||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 624 cactgattgatgcggcaaagcactatcttgttgaccgatacaaggatat 672
>gnl|LJGI|TC73952 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (19%)
Length = 816
Score = 381 bits (192), Expect = e-105
Identities = 345/396 (87%)
Strand = Plus / Plus
Query: 196 gctacagttgttagagttaaaacactgcatataagttctcctatcctggctgctaaaagc 255
|||||||||||| ||||| ||||||||||||| ||||||| ||| ||||| ||| |||||
Sbjct: 397 gctacagttgttcgagttgaaacactgcatatcagttctcttatactggcagctcaaagc 456
Query: 256 cctttcttctaccagcttttctcaaatgtgacgagtgagtcagagcagagacatatcacc 315
|||||||| |||| |||||||||| | ||| ||| || |||||||||||||| ||
Sbjct: 457 cctttctttcttaagctattctcaaatggtatgagcgagacaaagcagagacatatctcc 516
Query: 316 ctcagtattaatgcatctgaagaaactggtctcatggagctactcaaatttatgtatagt 375
||| | ||| |||||||||||||| |||||||||||||||||| |||||| |||| |||
Sbjct: 517 ctccggatttatgcatctgaagaagatggtctcatggagctactgaaatttttgtacagt 576
Query: 376 aataccttgaatatttctgcggcacctgctttactggatgtgcttatggctgcggataaa 435
||||| ||||||||| | || ||||||||||| |||||||| |||||||| || ||||||
Sbjct: 577 aatactttgaatattacggcagcacctgctttgctggatgtacttatggcggctgataaa 636
Query: 436 tttgatgtgccttcatgcatgaaatacttgctaaattcgcccatgacaactgactctgca 495
|||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||
Sbjct: 637 tttgatgtgccttcatgcatgagatacttgctaaatttgcccatgacaccggactctgca 696
Query: 496 ttactctacctggagcttcctcatactgttgttgcagcccaaccactgattgatgctgca 555
| ||||||| |||||||||||||||| |||| |||| |||||| |||||||||||||||
Sbjct: 697 tcactctacttggagcttcctcataccgttgatgcattccaaccgctgattgatgctgca 756
Query: 556 aagcagtatcttgttgaccgatacaaggatataacc 591
|||||||||||||||| ||||||| ||| ||||||
Sbjct: 757 aagcagtatcttgttggtcgatacagggaaataacc 792
>gnl|LJGI|FS332142 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (22%)
Length = 784
Score = 266 bits (134), Expect = 1e-70
Identities = 197/218 (90%)
Strand = Plus / Plus
Query: 334 gaagaaactggtctcatggagctactcaaatttatgtatagtaataccttgaatatttct 393
|||||| ||||||||||||||||||||||||||||||| || ||||| |||||||| |
Sbjct: 567 gaagaagctggtctcatggagctactcaaatttatgtacaggaatactttgaatatcacg 626
Query: 394 gcggcacctgctttactggatgtgcttatggctgcggataaatttgatgtgccttcatgc 453
|| ||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 627 gcagcacctgctttgctggatgtacttatggttgctgataaatttgatgtgccttcatgc 686
Query: 454 atgaaatacttgctaaattcgcccatgacaactgactctgcattactctacctggagctt 513
|||| |||||||||||||| |||||||||| |||||||||||| |||||||||||| |||
Sbjct: 687 atgagatacttgctaaatttgcccatgacacctgactctgcatcactctacctggaactt 746
Query: 514 cctcatactgttgttgcagcccaaccactgattgatgc 551
|||||||||||| |||| ||||||||||||||||||
Sbjct: 747 cctcatactgttaatgcaatccaaccactgattgatgc 784
Score = 99.6 bits (50), Expect = 2e-20
Identities = 116/138 (84%)
Strand = Plus / Plus
Query: 197 ctacagttgttagagttaaaacactgcatataagttctcctatcctggctgctaaaagcc 256
|||| |||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct: 362 ctactgttgttcgagttaaaacactgcatatcagttctcctatactggctgctcaaagcc 421
Query: 257 ctttcttctaccagcttttctcaaatgtgacgagtgagtcagagcagagacatatcaccc 316
||||||| | |||||||||| |||| || ||| || || ||||| ||||| || | |
Sbjct: 422 ctttcttttttaagcttttctctaatgggatgagcgaaacaaagcagggacatgtctctc 481
Query: 317 tcagtattaatgcatctg 334
|||| ||| |||||||||
Sbjct: 482 tcaggatttatgcatctg 499
>gnl|LJGI|TC62135 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 809
Score = 242 bits (122), Expect = 2e-63
Identities = 227/262 (86%)
Strand = Plus / Plus
Query: 196 gctacagttgttagagttaaaacactgcatataagttctcctatcctggctgctaaaagc 255
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 487 gctacagttgtcagagttaaaacactgcatataagttctcctatcctggcttctaaaagc 546
Query: 256 cctttcttctaccagcttttctcaaatgtgacgagtgagtcagagcagagacatatcacc 315
||||||||||| |||||||||| |||| || ||| |||||| || |||||||| |||||
Sbjct: 547 cctttcttctataagcttttctcgaatgggatgagggagtcaaaggagagacatgtcacc 606
Query: 316 ctcagtattaatgcatctgaagaaactggtctcatggagctactcaaatttatgtatagt 375
||||| |||||||| ||||||||| || ||| ||||| || || || |||||||| |||
Sbjct: 607 ctcaggattaatgcttctgaagaagatgctctaatggacctgctgaattttatgtacagt 666
Query: 376 aataccttgaatatttctgcggcacctgctttactggatgtgcttatggctgcggataaa 435
||||||||||| | |||| || | ||||| |||||||||||||||||||| ||||||
Sbjct: 667 aataccttgaaggctactgcaccatcagctttgctggatgtgcttatggctgctgataaa 726
Query: 436 tttgatgtgccttcatgcatga 457
||||| || ||||||||||||
Sbjct: 727 tttgaagttgcttcatgcatga 748
>gnl|LJGI|TC65663 similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1196
Score = 192 bits (97), Expect = 2e-48
Identities = 205/241 (85%)
Strand = Plus / Plus
Query: 223 catataagttctcctatcctggctgctaaaagccctttcttctaccagcttttctcaaat 282
||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 570 catattagttctcctatcttggctgctaaaagtcctttcttctacaagcttttctcaaat 629
Query: 283 gtgacgagtgagtcagagcagagacatatcaccctcagtattaatgcatctgaagaaact 342
| || ||| |||||||||||||| ||| ||||||| || |||| ||||||||| ||| ||
Sbjct: 630 gggatgagggagtcagagcagaggcatgtcaccctgagaattactgcatctgaggaagct 689
Query: 343 ggtctcatggagctactcaaatttatgtatagtaataccttgaatatttctgcggcacct 402
| |||||||||||| || || |||||||||||||||| ||| | ||| || | |||||
Sbjct: 690 gctctcatggagcttctgaactttatgtatagtaatagcttaagcattacttcaccacct 749
Query: 403 gctttactggatgtgcttatggctgcggataaatttgatgtgccttcatgcatgaaatac 462
| |||| |||||||| | |||||||| || |||||||| || |||||||||||| ||||
Sbjct: 750 ggtttattggatgtgttgatggctgctgacaaatttgaagttgcttcatgcatgagatac 809
Query: 463 t 463
|
Sbjct: 810 t 810
>gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 1623
Score = 145 bits (73), Expect = 4e-34
Identities = 163/193 (84%)
Strand = Plus / Plus
Query: 195 cgctacagttgttagagttaaaacactgcatataagttctcctatcctggctgctaaaag 254
||||||||||| ||||||| |||||||| ||| | |||| ||| |||||| |||||||
Sbjct: 264 cgctacagttgccagagttagaacactgcgtatcaaatctcgtatgctggctactaaaag 323
Query: 255 ccctttcttctaccagcttttctcaaatgtgacgagtgagtcagagcagagacatatcac 314
|||||||||||| ||||||||||||||| ||||| || ||||||| || |||| ||||
Sbjct: 324 ccctttcttctataagcttttctcaaatgggacgactggatcagagctgaaacatgtcac 383
Query: 315 cctcagtattaatgcatctgaagaaactggtctcatggagctactcaaatttatgtatag 374
|||||| |||||||||||||||||| ||| ||||||| ||||| | | |||||||| ||
Sbjct: 384 cctcaggattaatgcatctgaagaagctgttctcatgaagctattgagatttatgtgcag 443
Query: 375 taataccttgaat 387
||| ||||||||
Sbjct: 444 caatcccttgaat 456
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 463 ttgctaaattcgcccatgacaactgactctgcattactctacctggagcttcctcatac 521
|||| ||||| ||||||| || |||||||| ||||||| ||| ||||||||||||||||
Sbjct: 508 ttgccaaatttgcccatggcacctgactctccattactttacgtggagcttcctcatac 566
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 546 tgatgctgcaaagcagtatcttgttgaccgatacaaggatataacc 591
||||||||| ||||||||||||| || || |||||||||| |||||
Sbjct: 579 tgatgctgccaagcagtatcttgctggccaatacaaggatttaacc 624
>gnl|LJGI|DC599778 weakly similar to UniRef100_A9S1Y2 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(12%)
Length = 575
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 299 agcagagacatatcaccctcagtattaatgcatctgaagaaactggtctcatggagctac 358
|||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||
Sbjct: 268 agcagagacactacaccctcaggattaatgcatctgaagaagctgttctcatggagctac 327
Query: 359 tcaaatttatgt 370
| ||||||||||
Sbjct: 328 taaaatttatgt 339
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 463 ttgctaaattcgcccatgacaactgactctgcattactctacctggagcttcctcatact 522
|||| |||||| ||||||||| ||||||||||||| | ||||| |||||||||||||||
Sbjct: 423 ttgcaaaattcccccatgacacttgactctgcattattttacctcgagcttcctcatact 482
Query: 523 gt 524
||
Sbjct: 483 gt 484
>gnl|LJGI|BW596436 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (14%)
Length = 495
Score = 81.8 bits (41), Expect = 5e-15
Identities = 115/139 (82%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 182 tggatggctctgccgctacagttgtt---agagttaaaacactgcatataagttctccta 238
||||||||||||| | ||| |||||| || ||||||| |||||||| | ||||| ||
Sbjct: 326 tggatggctctgcagttactgttgttgtcagtgttaaaatcctgcatatcaattctctta 385
Query: 239 tcctggctgctaaaagccctttcttctaccagcttttctcaaatgtgacgagtgagtcag 298
|| |||||||||| ||| |||||||| | |||||||||| |||| || ||| |||||||
Sbjct: 386 tcttggctgctaagagcactttcttccataagcttttctccaatgggatgagggagtcag 445
Query: 299 agcagagacatatcaccct 317
|| |||||||| |||||||
Sbjct: 446 aggagagacatgtcaccct 464
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 23 atgttggcttcgctttcaatgacagccgtttctcagacaaggttctccgtatcgag 78
|||||||||||||||||||||||||| ||| || |||| ||||||||| ||||||
Sbjct: 86 atgttggcttcgctttcaatgacagcaatttttccgacagggttctccggatcgag 141
>gnl|LJGI|FS326466 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (16%)
Length = 691
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 468 aaattcgcccatgacaactgactctgcattactctacctggagcttcctcatactgt 524
|||||||||| ||||| ||||||| |||||| | ||||| ||||| |||||||||||
Sbjct: 366 aaattcgcccttgacacctgactcggcattattttacctcgagctacctcatactgt 422