Miyakogusa Predicted Gene

Lj3g3v0041900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0041900.1 tr|G7IIA0|G7IIA0_MEDTR Sodium-coupled neutral
amino acid transporter OS=Medicago truncatula
GN=MTR_2,88.83,0,Aa_trans,Amino acid transporter, transmembrane;
SUBFAMILY NOT NAMED,NULL; AMINO ACID TRANSPORTER,NUL,CUFF.40230.1
         (634 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS359758 similar to UniRef100_A7Q8X6 Cluster: Chromosom...   682   0.0  

>gnl|LJGI|FS359758 similar to UniRef100_A7Q8X6 Cluster: Chromosome chr9 scaffold_65,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_65, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 653

 Score =  682 bits (344), Expect = 0.0
 Identities = 356/360 (98%)
 Strand = Plus / Minus

                                                                       
Query: 275 tccctgttattcatttctccctacgccaaacggtggatgccttggtgtttgagggatctc 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tccctgttattcatttctccctacgccaaacggtggatgccttggtgtttgagggatctc 594

                                                                       
Query: 335 ctcccttatcagaaagtaggaagagatcgttggggttgacttttgttctgttgatcctca 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ctcccttatcagaaagtaggaagagatcgttggggttgacttttgttctgttgatcctca 534

                                                                       
Query: 395 tatatattgggtctaccatgattccaaacatttggacagcttttaagttcaccggtgcaa 454
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tatatattgggtctaccatgattccaaacatttggacagcttttaagttcaccggtgcaa 474

                                                                       
Query: 455 ccacagcagtttcattgggtttcatatttccatctcttgttgcattgagattgagccata 514
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ccacagcagtttcattgggtttcatatttccatctcttgttgcattgagattgagccata 414

                                                                       
Query: 515 agtgggatttgagccatggagaatggattttatcttggttaatgttggtattggctggga 574
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtgggatttgagccatggagaatggattttatcttggttaatgttggtattggctggga 354

                                                                       
Query: 575 ttgttagcataggaggaggcattggaaatgtctatagcatgcagagtaaggctcaatgac 634
           |||||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||
Sbjct: 353 ttgttagcatagtaggagtcattggcaatgtctatagcatgcagagtaagtctcaatgac 294