Miyakogusa Predicted Gene

Lj3g3v0040870.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0040870.1 Non Chatacterized Hit- tr|K4BLN2|K4BLN2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,70.23,0,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED NODULIN-LIKE
PROTEIN,NULL; Nodulin-like,Nodulin-like; no d,CUFF.40372.1
         (1692 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58832 weakly similar to UniRef100_Q8H6R3 Cluster: Nod...    64   3e-09
gnl|LJGI|TC76372 similar to UniRef100_A7Q8X8 Cluster: Chromosome...    58   2e-07

>gnl|LJGI|TC58832 weakly similar to UniRef100_Q8H6R3 Cluster: Nodulin-like protein;
            n=1; Poncirus trifoliata|Rep: Nodulin-like protein -
            Poncirus trifoliata (Hardy orange), partial (26%)
          Length = 778

 Score = 63.9 bits (32), Expect = 3e-09
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                
Query: 1381 actgtctcagagctttttggtttgaagcactttggt 1416
            |||||||| |||||||||||||||||||||||||||
Sbjct: 172  actgtctcggagctttttggtttgaagcactttggt 207


>gnl|LJGI|TC76372 similar to UniRef100_A7Q8X8 Cluster: Chromosome chr9 scaffold_65,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_65, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (38%)
          Length = 1183

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                         
Query: 1390 gagctttttggtttgaagcactttggtgt 1418
            |||||||||||||||||||||||||||||
Sbjct: 445  gagctttttggtttgaagcactttggtgt 473