Miyakogusa Predicted Gene
- Lj3g3v0030650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0030650.1 tr|G7IMC1|G7IMC1_MEDTR 3-isopropylmalate
dehydrogenase OS=Medicago truncatula GN=MTR_2g104610 PE=3
S,83.33,0,Isocitrate/Isopropylmalate dehydrogenase-like,NULL;
Iso_dh,Isopropylmalate dehydrogenase-like domain,CUFF.40222.1
(1227 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63238 similar to UniRef100_P29102 Cluster: 3-isopropy... 2416 0.0
gnl|LJGI|FS332652 similar to UniRef100_Q45NI4 Cluster: 3-isoprop... 700 0.0
>gnl|LJGI|TC63238 similar to UniRef100_P29102 Cluster: 3-isopropylmalate dehydrogenase,
chloroplast precursor; n=1; Brassica napus|Rep:
3-isopropylmalate dehydrogenase, chloroplast precursor -
Brassica napus (Rape), partial (92%)
Length = 1661
Score = 2416 bits (1219), Expect = 0.0
Identities = 1225/1227 (99%)
Strand = Plus / Plus
Query: 1 atggcggcttctgtgcaaatgcagctcctccacgccagacctatgaaagcctctccgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atggcggcttctgtgcaaatgcagctcctccacgccagacctatgaaagcctctccgttt 161
Query: 61 ccctcattctccttgccgagaccaacctccatgcggtgtagatgttccgccgccacccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ccctcattctccttgccgagaccaacctccatgcggtgtagatgttccgccgccacccct 221
Query: 121 tcgaaaaaatcctactccatcactcttcttcccggtgacggaatcggccctgaagtcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tcgaaaaaatcctactccatcactcttcttcccggtgacggaatcggccctgaagtcgtc 281
Query: 181 tccgtcgctaaagacgttcttctcctcgccggctctctccatgggatcaatttcgagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tccgtcgctaaagacgttcttctcctcgccggctctctccatgggatcaatttcgagttc 341
Query: 241 agagagatgcttctgggtggagctgcctttgatgctgcgggagtccccttacctgacgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agagagatgcttctgggtggagctgcctttgatgctgcgggagtccccttacctgacgag 401
Query: 301 accctttccgttgcaaagcagtctgatgctattctccttggtgccattggaggctataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 accctttccgttgcaaagcagtctgatgctattctccttggtgccattggaggctataaa 461
Query: 361 tgggataaaaacgagacgcgtttgaagccagagacgggtctgcttcagctacgagaagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tgggataaaaacgagacgcgtttgaagccagagacgggtctgcttcagctacgagaagga 521
Query: 421 cttcaagtgtttgcaaatctcagaccagcaactgtgttcccacagttagtggatgcttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cttcaagtgtttgcaaatctcagaccagcaactgtgttcccacagttagtggatgcttca 581
Query: 481 actttgaagaaagagattgctgaaggggttgatcttatggttgtaagggagctaactgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 actttgaagaaagagattgctgaaggggttgatcttatggttgtaagggagctaactgga 641
Query: 541 ggtatctattttggaaaacccaggggctttggcaccaatgaaaatggtgaagagattggc 600
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 642 ggtatctattttggaaaacccaggggctttggtaccaatgaaaatggtgaagagtttggc 701
Query: 601 tttaatactgagattaatactgcacatgagattgatcgcatagctcgtgttgcatttaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tttaatactgagattaatactgcacatgagattgatcgcatagctcgtgttgcatttaag 761
Query: 661 attgctcggcagcgtcgtgggaaactttgctctgttgacaaagccaatgtactagaggca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 attgctcggcagcgtcgtgggaaactttgctctgttgacaaagccaatgtactagaggca 821
Query: 721 tccatgttatggaggaaaagagtaattgcattatcacacgaatatcctgatgttgagctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tccatgttatggaggaaaagagtaattgcattatcacacgaatatcctgatgttgagctc 881
Query: 781 tcacacatgtatgttgataacgcctcaatgcaacttgttcgctatccaaaacagtttgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 tcacacatgtatgttgataacgcctcaatgcaacttgttcgctatccaaaacagtttgac 941
Query: 841 acaatcgtaacaaacaacatttttggcgacatattatcagatgaggcttcaatgattact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 acaatcgtaacaaacaacatttttggcgacatattatcagatgaggcttcaatgattact 1001
Query: 901 ggaagtattgggatgcttccttcagccagccttgcggattcgggacctgggctctttgaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 ggaagtattgggatgcttccttcagccagccttgcggattcgggacctgggctctttgaa 1061
Query: 961 cctatacatggttctgcacctgatattgctggacaggacaaggcaaacccatttgccact 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 cctatacatggttctgcacctgatattgctggacaggacaaggcaaacccatttgccact 1121
Query: 1021 gttttaagtgccgctatgcttttaagatatggacttggagaagaggaggctgcaaaaaga 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gttttaagtgccgctatgcttttaagatatggacttggagaagaggaggctgcaaaaaga 1181
Query: 1081 atagaggatgcagttgtagatactttgaacagaggattccgaactgctgacatatattct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 atagaggatgcagttgtagatactttgaacagaggattccgaactgctgacatatattct 1241
Query: 1141 gctggaacaaaactagtaggatgcaagcaactgggtgaagaaatactgaagtcagttgaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 gctggaacaaaactagtaggatgcaagcaactgggtgaagaaatactgaagtcagttgaa 1301
Query: 1201 tctctcgttcctgctgcagcagtgtga 1227
|||||||||||||||||||||||||||
Sbjct: 1302 tctctcgttcctgctgcagcagtgtga 1328
>gnl|LJGI|FS332652 similar to UniRef100_Q45NI4 Cluster: 3-isopropylmalate
dehydrogenase; n=1; Medicago sativa|Rep:
3-isopropylmalate dehydrogenase - Medicago sativa
(Alfalfa), partial (44%)
Length = 513
Score = 700 bits (353), Expect = 0.0
Identities = 353/353 (100%)
Strand = Plus / Plus
Query: 1 atggcggcttctgtgcaaatgcagctcctccacgccagacctatgaaagcctctccgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atggcggcttctgtgcaaatgcagctcctccacgccagacctatgaaagcctctccgttt 123
Query: 61 ccctcattctccttgccgagaccaacctccatgcggtgtagatgttccgccgccacccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ccctcattctccttgccgagaccaacctccatgcggtgtagatgttccgccgccacccct 183
Query: 121 tcgaaaaaatcctactccatcactcttcttcccggtgacggaatcggccctgaagtcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tcgaaaaaatcctactccatcactcttcttcccggtgacggaatcggccctgaagtcgtc 243
Query: 181 tccgtcgctaaagacgttcttctcctcgccggctctctccatgggatcaatttcgagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tccgtcgctaaagacgttcttctcctcgccggctctctccatgggatcaatttcgagttc 303
Query: 241 agagagatgcttctgggtggagctgcctttgatgctgcgggagtccccttacctgacgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agagagatgcttctgggtggagctgcctttgatgctgcgggagtccccttacctgacgag 363
Query: 301 accctttccgttgcaaagcagtctgatgctattctccttggtgccattggagg 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 accctttccgttgcaaagcagtctgatgctattctccttggtgccattggagg 416